| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14358 | 1:2,792,161-2,795,160 | + | C1H1g22094 | CX1g004872 | LOC_Os01g06920 | Os01g0163000 | - | Detail |
| C2H1g23492 | 1:2,813,034-2,813,606 | - | C1H1g08662 | - | LOC_Os01g07010 | Os01g0164075 | - | Detail |
| C2H1g03264 | 1:2,821,163-2,821,720 | - | C1H1g08662 | - | LOC_Os01g07030 | Os01g0164075 | - | Detail |
| C2H1g11995 | 1:2,828,989-2,829,576 | - | C1H1g08662 | - | LOC_Os01g07060 | Os01g0164300 | - | Detail |
| C2H1g01310 | 1:2,831,354-2,835,606 | + | C1H1g24044 | CX1g001881 | LOC_Os01g07070 | Os01g0164400 | - | Detail |
| C2H1g17499 | 1:2,837,245-2,840,624 | - | C1H1g01954 | CX1g000968 | LOC_Os01g07080 | Os01g0164500 | - | Detail |
| C2H1g10134 | 1:2,840,947-2,843,880 | - | C1H1g15703 | CX1g003856 | LOC_Os01g07090 | Os01g0164600 | - | Detail |
| C2H1g02724 | 1:2,844,048-2,851,039 | + | C1H1g09727 | CX1g006755 | LOC_Os01g07100 | Os01g0164700 | - | Detail |
| C2H1g08155 | 1:2,852,883-2,857,906 | - | C1H1g24474 | CX1g006690 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| C2H1g24105 | 1:2,859,055-2,862,637 | - | C1H1g28973 | CX1g006690 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| C2H1g23761 | 1:2,864,027-2,866,108 | + | C1H1g28709 | CX1g005149 | LOC_Os01g07120 | Os01g0165000 | - | Detail |
| C2H1g13562 | 1:2,866,356-2,868,310 | - | C1H1g06420 | CX1g003505 | LOC_Os01g07130 | Os01g0165100 | - | Detail |
| C2H1g23637 | 1:2,869,753-2,873,978 | - | C1H1g09488 | CX1g005200 | LOC_Os01g07140 | Os01g0165200 | - | Detail |
| C2H1g30286 | 1:2,882,413-2,882,925 | + | C1H1g25773 | CX1g002920 | LOC_Os01g07150 | Os01g0165600 | - | Detail |
| C2H1g08507 | 1:2,916,963-2,919,937 | + | C1H1g11655 | CX1g007089 | LOC_Os01g07200 | Os01g0166100 | - | Detail |
| C2H1g28566 | 1:2,920,331-2,921,588 | - | - | CX1g000925 | - | Os01g0166200 | - | Detail |
| C2H1g01020 | 1:2,920,640-2,922,748 | + | C1H1g25978 | CX1g002009 | LOC_Os01g07212 | Os01g0166300 | - | Detail |
| C2H1g10111 | 1:2,924,908-2,926,588 | + | C1H1g13936 | - | LOC_Os01g07212 | Os01g0166400 | - | Detail |
| C2H1g05149 | 1:2,935,050-2,935,772 | - | C1H1g01275 | CX1g006194 | LOC_Os01g07240 | Os01g0166500 | - | Detail |
| C2H1g02905 | 1:2,946,364-2,948,056 | + | C1H1g07427 | CX1g000127 | LOC_Os01g07250 | Os01g0166700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000313 | 1:4,234,191-4,234,744 | + | C1H1g00651 | C2H1g17347 | LOC_Os01g09500 | Os01g0191000 | - | Detail |
| CX1g000803 | 1:4,236,508-4,237,971 | - | C1H1g26240 | C2H1g04431 | LOC_Os01g09540 | Os01g0191200 | - | Detail |
| CX1g002554 | 1:4,244,447-4,249,935 | - | C1H1g18220 | C2H1g28549 | LOC_Os01g09550 | Os01g0191300 | OsNAC006 | Detail |
| CX1g003362 | 1:4,262,757-4,267,631 | + | C1H1g10376 | C2H1g26380 | LOC_Os01g09560 | Os01g0191500 | - | Detail |
| CX1g000501 | 1:4,269,313-4,269,465 | - | C1H4g20138 | - | - | - | - | Detail |
| CX1g007135 | 1:4,276,911-4,280,232 | + | C1H1g21626 | C2H1g02135 | LOC_Os01g09570 | Os01g0191700 | - | Detail |
| CX1g004403 | 1:4,281,375-4,284,514 | - | C1H1g30896 | C2H1g00634 | LOC_Os01g09580 | Os01g0191800 | - | Detail |
| CX1g007052 | 1:4,289,403-4,290,346 | - | C1H1g20220 | C2H1g29230 | LOC_Os01g09590 | Os01g0191900 | Os2R_MYB4 | Detail |
| CX1g003235 | 1:4,294,949-4,296,566 | + | - | - | - | - | - | Detail |
| CX1g005789 | 1:4,299,807-4,300,043 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g001237 | 1:4,307,415-4,308,593 | - | - | C2H1g26016 | LOC_Os01g09620 | Os01g0192000 | - | Detail |
| CX1g003070 | 1:4,323,396-4,323,551 | + | - | - | - | - | - | Detail |
| CX1g000801 | 1:4,331,732-4,333,255 | - | C1H1g28550 | C2H1g07972 | LOC_Os01g09640 | Os01g0192300 | - | Detail |
| CX1g000516 | 1:4,343,622-4,343,870 | + | - | - | - | - | - | Detail |
| CX1g000950 | 1:4,345,649-4,346,466 | + | C1H7g20360 | C2H7g10129 | LOC_Os01g15620 | - | - | Detail |
| CX1g004357 | 1:4,347,558-4,347,761 | + | - | C2H1g22157 | - | - | - | Detail |
| CX1g006171 | 1:4,349,083-4,351,836 | - | C1H1g14238 | C2H1g16065 | LOC_Os01g09670 | Os01g0192600 | - | Detail |
| CX1g005144 | 1:4,370,751-4,372,353 | - | C1H1g03026 | C2H1g05922 | LOC_Os01g09700 | Os01g0192900 | OS-ACS5 | Detail |
| CX1g000453 | 1:4,383,561-4,383,722 | + | - | - | - | Os09g0341901 | - | Detail |
| CX1g001901 | 1:4,397,376-4,398,050 | + | C1H1g18015 | C2H1g18028 | LOC_Os01g09720 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |