| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g02686 | 7:17,815,369-17,822,943 | - | C1H7g05326 | CX7g048679 | LOC_Os07g36630 | Os07g0551700 | OsCSLF8 | Detail |
| C2H7g20205 | 7:17,827,345-17,827,563 | - | C1H7g16287 | CX7g047261 | - | - | - | Detail |
| C2H7g08347 | 7:17,827,709-17,828,471 | - | C1H7g16287 | - | LOC_Os05g34870 | Os07g0120051 | - | Detail |
| C2H7g08509 | 7:17,858,146-17,865,499 | + | C1H7g03133 | CX7g046578 | LOC_Os07g36740 | Os07g0553300 | OsCSLF4 | Detail |
| C2H7g18068 | 7:17,885,222-17,897,471 | - | C1H7g25054 | - | - | - | - | Detail |
| C2H7g20400 | 7:17,912,228-17,915,233 | + | C1H7g07129 | CX7g048432 | LOC_Os07g36690 | Os07g0552800 | - | Detail |
| C2H7g29262 | 7:17,924,118-17,928,387 | + | C1H7g08000 | CX7g049316 | LOC_Os07g36700 | Os07g0553000 | OsCSLF1 | Detail |
| C2H7g11021 | 7:17,951,802-17,953,186 | + | C1H7g05879 | CX7g047658 | - | - | - | Detail |
| C2H7g20268 | 7:17,962,669-17,965,461 | + | C1H7g00995 | CX7g048406 | LOC_Os07g36700 | Os07g0553000 | OsCSLF1 | Detail |
| C2H7g14663 | 7:17,974,336-17,977,903 | - | C1H7g11381 | CX7g050331 | LOC_Os07g36740 | Os07g0553300 | OsCSLF4 | Detail |
| C2H7g02674 | 7:17,981,607-17,984,854 | - | C1H7g20091 | CX7g048560 | LOC_Os07g36750 | Os07g0553400 | OsCSLF3, CSLF3, OsCslF3 | Detail |
| C2H7g21373 | 7:17,989,439-17,996,600 | - | C1H7g16802 | CX7g049074 | LOC_Os07g36780 | Os07g0553633 | SDRLK-41 | Detail |
| C2H7g21004 | 7:18,003,411-18,005,412 | + | C1H7g19652 | CX7g048842 | LOC_Os07g36800 | Os07g0449100 | - | Detail |
| C2H7g28288 | 7:18,013,082-18,013,753 | + | C1H7g15456 | CX7g047990 | LOC_Os07g36810 | Os07g0553800 | - | Detail |
| C2H7g27236 | 7:18,018,593-18,022,258 | - | C1H7g18331 | CX7g049208 | LOC_Os07g36820 | - | - | Detail |
| C2H7g24312 | 7:18,045,273-18,046,344 | - | C1H7g15464 | CX7g046959 | LOC_Os07g36890 | Os07g0645701 | - | Detail |
| C2H7g23696 | 7:18,047,336-18,049,895 | - | C1H7g18394 | - | LOC_Os07g36900 | - | - | Detail |
| C2H7g15216 | 7:18,066,583-18,068,769 | + | C1H7g13032 | CX7g047800 | LOC_Os07g36920 | Os07g0555000 | OsFbox394 | Detail |
| C2H7g24405 | 7:18,077,182-18,077,949 | + | C1H7g28218 | CX7g047657 | LOC_Os07g36930 | Os07g0555100 | - | Detail |
| C2H7g12564 | 7:18,093,061-18,095,654 | + | C1H7g30162 | CX7g047800 | LOC_Os07g36930 | Os07g0555100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000313 | 1:4,234,191-4,234,744 | + | C1H1g00651 | C2H1g17347 | LOC_Os01g09500 | Os01g0191000 | - | Detail |
| CX1g000803 | 1:4,236,508-4,237,971 | - | C1H1g26240 | C2H1g04431 | LOC_Os01g09540 | Os01g0191200 | - | Detail |
| CX1g002554 | 1:4,244,447-4,249,935 | - | C1H1g18220 | C2H1g28549 | LOC_Os01g09550 | Os01g0191300 | OsNAC006 | Detail |
| CX1g003362 | 1:4,262,757-4,267,631 | + | C1H1g10376 | C2H1g26380 | LOC_Os01g09560 | Os01g0191500 | - | Detail |
| CX1g000501 | 1:4,269,313-4,269,465 | - | C1H4g20138 | - | - | - | - | Detail |
| CX1g007135 | 1:4,276,911-4,280,232 | + | C1H1g21626 | C2H1g02135 | LOC_Os01g09570 | Os01g0191700 | - | Detail |
| CX1g004403 | 1:4,281,375-4,284,514 | - | C1H1g30896 | C2H1g00634 | LOC_Os01g09580 | Os01g0191800 | - | Detail |
| CX1g007052 | 1:4,289,403-4,290,346 | - | C1H1g20220 | C2H1g29230 | LOC_Os01g09590 | Os01g0191900 | Os2R_MYB4 | Detail |
| CX1g003235 | 1:4,294,949-4,296,566 | + | - | - | - | - | - | Detail |
| CX1g005789 | 1:4,299,807-4,300,043 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g001237 | 1:4,307,415-4,308,593 | - | - | C2H1g26016 | LOC_Os01g09620 | Os01g0192000 | - | Detail |
| CX1g003070 | 1:4,323,396-4,323,551 | + | - | - | - | - | - | Detail |
| CX1g000801 | 1:4,331,732-4,333,255 | - | C1H1g28550 | C2H1g07972 | LOC_Os01g09640 | Os01g0192300 | - | Detail |
| CX1g000516 | 1:4,343,622-4,343,870 | + | - | - | - | - | - | Detail |
| CX1g000950 | 1:4,345,649-4,346,466 | + | C1H7g20360 | C2H7g10129 | LOC_Os01g15620 | - | - | Detail |
| CX1g004357 | 1:4,347,558-4,347,761 | + | - | C2H1g22157 | - | - | - | Detail |
| CX1g006171 | 1:4,349,083-4,351,836 | - | C1H1g14238 | C2H1g16065 | LOC_Os01g09670 | Os01g0192600 | - | Detail |
| CX1g005144 | 1:4,370,751-4,372,353 | - | C1H1g03026 | C2H1g05922 | LOC_Os01g09700 | Os01g0192900 | OS-ACS5 | Detail |
| CX1g000453 | 1:4,383,561-4,383,722 | + | - | - | - | Os09g0341901 | - | Detail |
| CX1g001901 | 1:4,397,376-4,398,050 | + | C1H1g18015 | C2H1g18028 | LOC_Os01g09720 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |