| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g29554 | 4:20,262,748-20,266,346 | - | C2H4g28234 | CX4g032500 | LOC_Os04g39080 | Os04g0464966 | OsFbox217, Os_F0121, MOF | Detail |
| C1H4g24682 | 4:20,267,111-20,273,354 | + | C2H4g22620 | CX4g036673 | LOC_Os04g39090 | Os04g0465000 | - | Detail |
| C1H4g22908 | 4:20,283,468-20,284,359 | - | C2H4g19933 | CX4g036602 | LOC_Os04g39110 | Os04g0465300 | GASR2, OsGASR2 | Detail |
| C1H4g23208 | 4:20,290,713-20,293,342 | + | C2H4g08157 | CX4g032042 | LOC_Os04g39130 | Os04g0465432 | - | Detail |
| C1H4g20155 | 4:20,293,799-20,295,420 | - | C2H4g13916 | CX4g034470 | LOC_Os04g39140 | Os04g0465500 | - | Detail |
| C1H4g19202 | 4:20,296,900-20,297,575 | + | C2H4g18235 | CX4g035849 | LOC_Os04g39150 | Os04g0465600 | OsMLP423 | Detail |
| C1H4g22593 | 4:20,298,986-20,304,646 | + | C2H4g13664 | CX4g033981 | LOC_Os04g39160 | Os04g0465700 | OsRDR2, FEM1 | Detail |
| C1H4g27473 | 4:20,305,570-20,307,099 | + | C2H4g05826 | CX4g033685 | LOC_Os04g39170 | Os04g0465800 | - | Detail |
| C1H4g15375 | 4:20,308,001-20,309,650 | - | C2H4g07790 | CX4g033509 | LOC_Os04g39180 | Os04g0465900 | OsARK2 | Detail |
| C1H4g12025 | 4:20,308,053-20,312,034 | + | - | - | - | Os04g0465800 | - | Detail |
| C1H4g10317 | 4:20,322,559-20,325,645 | - | C2H4g05821 | CX4g036412 | LOC_Os04g39190 | Os04g0466100 | - | Detail |
| C1H4g15967 | 4:20,339,773-20,342,893 | + | C2H4g04162 | CX4g035488 | LOC_Os04g39210 | Os04g0466600 | - | Detail |
| C1H4g23954 | 4:20,343,421-20,352,308 | - | C2H4g02293 | CX4g033308 | LOC_Os04g39220 | Os04g0466700 | - | Detail |
| C1H4g26968 | 4:20,354,865-20,355,517 | + | C2H4g08624 | CX4g033180 | LOC_Os04g39230 | Os04g0467000 | - | Detail |
| C1H4g20963 | 4:20,355,999-20,361,816 | - | C2H4g13693 | CX4g031432 | LOC_Os04g39240 | Os04g0467100 | - | Detail |
| C1H4g31113 | 4:20,382,618-20,387,307 | - | C2H4g09111 | CX4g033763 | LOC_Os04g39260 | Os04g0467400 | - | Detail |
| C1H4g30490 | 4:20,387,980-20,391,089 | - | C2H4g05588 | CX4g035308 | LOC_Os04g39270 | Os04g0467700 | - | Detail |
| C1H4g19832 | 4:20,392,676-20,397,141 | - | C2H4g22782 | CX4g032151 | LOC_Os04g39280 | Os04g0467800 | - | Detail |
| C1H4g15083 | 4:20,397,403-20,404,033 | - | C2H4g10668 | CX4g035147 | LOC_Os04g53760 | Os04g0467901 | OsKCH2 | Detail |
| C1H4g13002 | 4:20,407,128-20,407,905 | - | C2H4g00826 | CX4g031871 | LOC_Os04g39290 | Os04g0468600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000313 | 1:4,234,191-4,234,744 | + | C1H1g00651 | C2H1g17347 | LOC_Os01g09500 | Os01g0191000 | - | Detail |
| CX1g000803 | 1:4,236,508-4,237,971 | - | C1H1g26240 | C2H1g04431 | LOC_Os01g09540 | Os01g0191200 | - | Detail |
| CX1g002554 | 1:4,244,447-4,249,935 | - | C1H1g18220 | C2H1g28549 | LOC_Os01g09550 | Os01g0191300 | OsNAC006 | Detail |
| CX1g003362 | 1:4,262,757-4,267,631 | + | C1H1g10376 | C2H1g26380 | LOC_Os01g09560 | Os01g0191500 | - | Detail |
| CX1g000501 | 1:4,269,313-4,269,465 | - | C1H4g20138 | - | - | - | - | Detail |
| CX1g007135 | 1:4,276,911-4,280,232 | + | C1H1g21626 | C2H1g02135 | LOC_Os01g09570 | Os01g0191700 | - | Detail |
| CX1g004403 | 1:4,281,375-4,284,514 | - | C1H1g30896 | C2H1g00634 | LOC_Os01g09580 | Os01g0191800 | - | Detail |
| CX1g007052 | 1:4,289,403-4,290,346 | - | C1H1g20220 | C2H1g29230 | LOC_Os01g09590 | Os01g0191900 | Os2R_MYB4 | Detail |
| CX1g003235 | 1:4,294,949-4,296,566 | + | - | - | - | - | - | Detail |
| CX1g005789 | 1:4,299,807-4,300,043 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g001237 | 1:4,307,415-4,308,593 | - | - | C2H1g26016 | LOC_Os01g09620 | Os01g0192000 | - | Detail |
| CX1g003070 | 1:4,323,396-4,323,551 | + | - | - | - | - | - | Detail |
| CX1g000801 | 1:4,331,732-4,333,255 | - | C1H1g28550 | C2H1g07972 | LOC_Os01g09640 | Os01g0192300 | - | Detail |
| CX1g000516 | 1:4,343,622-4,343,870 | + | - | - | - | - | - | Detail |
| CX1g000950 | 1:4,345,649-4,346,466 | + | C1H7g20360 | C2H7g10129 | LOC_Os01g15620 | - | - | Detail |
| CX1g004357 | 1:4,347,558-4,347,761 | + | - | C2H1g22157 | - | - | - | Detail |
| CX1g006171 | 1:4,349,083-4,351,836 | - | C1H1g14238 | C2H1g16065 | LOC_Os01g09670 | Os01g0192600 | - | Detail |
| CX1g005144 | 1:4,370,751-4,372,353 | - | C1H1g03026 | C2H1g05922 | LOC_Os01g09700 | Os01g0192900 | OS-ACS5 | Detail |
| CX1g000453 | 1:4,383,561-4,383,722 | + | - | - | - | Os09g0341901 | - | Detail |
| CX1g001901 | 1:4,397,376-4,398,050 | + | C1H1g18015 | C2H1g18028 | LOC_Os01g09720 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |