| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g26114 | 6:1,370,954-1,375,564 | - | C2H6g22649 | CX6g045585 | LOC_Os06g04390 | Os06g0134900 | - | Detail |
| C1H6g13384 | 6:1,376,323-1,376,529 | - | - | - | - | - | - | Detail |
| C1H6g14899 | 6:1,377,126-1,377,551 | - | - | - | LOC_Os06g04420 | Os06g0135460 | - | Detail |
| C1H6g17670 | 6:1,383,919-1,388,265 | - | C2H6g20533 | CX6g044281 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| C1H6g26324 | 6:1,388,393-1,390,486 | - | C2H6g20533 | CX6g044281 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| C1H6g18799 | 6:1,391,285-1,394,599 | - | C2H6g29697 | CX6g041186 | LOC_Os06g04460 | Os06g0136000 | - | Detail |
| C1H6g16251 | 6:1,396,130-1,398,325 | - | C2H6g03212 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g20742 | 6:1,402,181-1,402,758 | + | C2H6g27965 | CX6g042860 | LOC_Os06g04480 | Os06g0136300 | - | Detail |
| C1H6g01692 | 6:1,406,635-1,409,322 | + | C2H6g24780 | CX6g043687 | LOC_Os06g04500 | Os06g0136500 | - | Detail |
| C1H6g11836 | 6:1,410,153-1,415,440 | - | C2H6g14254 | CX6g043134 | LOC_Os06g04510 | Os06g0136600 | - | Detail |
| C1H6g12650 | 6:1,416,922-1,427,968 | + | C2H6g06858 | CX6g041242 | LOC_Os06g04520 | Os06g0136700 | - | Detail |
| C1H6g27183 | 6:1,428,593-1,431,514 | + | C2H6g29816 | CX6g041371 | LOC_Os06g04530 | Os06g0136800 | - | Detail |
| C1H6g03718 | 6:1,451,405-1,460,252 | - | C2H6g26508 | CX6g041492 | LOC_Os06g04560 | Os06g0137100 | - | Detail |
| C1H6g13843 | 6:1,456,879-1,457,141 | + | - | - | - | Os06g0137166 | - | Detail |
| C1H6g00708 | 6:1,465,236-1,468,187 | + | C2H6g14543 | CX6g043823 | LOC_Os06g04580 | Os06g0137300 | OsYAF9 | Detail |
| C1H6g23167 | 6:1,474,897-1,475,322 | + | C2H6g11377 | CX6g045942 | LOC_Os06g04590 | Os06g0137400 | - | Detail |
| C1H6g20269 | 6:1,477,326-1,478,309 | - | C2H6g14283 | - | - | - | - | Detail |
| C1H6g03688 | 6:1,478,396-1,483,718 | - | C2H6g05549 | CX6g043470 | LOC_Os06g04600 | Os06g0137500 | - | Detail |
| C1H6g19756 | 6:1,484,487-1,487,333 | + | C2H6g21165 | CX6g042032 | LOC_Os06g04610 | Os06g0137600 | - | Detail |
| C1H6g26864 | 6:1,492,096-1,493,223 | + | C2H6g25322 | CX6g045659 | LOC_Os06g04620 | Os06g0137700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000313 | 1:4,234,191-4,234,744 | + | C1H1g00651 | C2H1g17347 | LOC_Os01g09500 | Os01g0191000 | - | Detail |
| CX1g000803 | 1:4,236,508-4,237,971 | - | C1H1g26240 | C2H1g04431 | LOC_Os01g09540 | Os01g0191200 | - | Detail |
| CX1g002554 | 1:4,244,447-4,249,935 | - | C1H1g18220 | C2H1g28549 | LOC_Os01g09550 | Os01g0191300 | OsNAC006 | Detail |
| CX1g003362 | 1:4,262,757-4,267,631 | + | C1H1g10376 | C2H1g26380 | LOC_Os01g09560 | Os01g0191500 | - | Detail |
| CX1g000501 | 1:4,269,313-4,269,465 | - | C1H4g20138 | - | - | - | - | Detail |
| CX1g007135 | 1:4,276,911-4,280,232 | + | C1H1g21626 | C2H1g02135 | LOC_Os01g09570 | Os01g0191700 | - | Detail |
| CX1g004403 | 1:4,281,375-4,284,514 | - | C1H1g30896 | C2H1g00634 | LOC_Os01g09580 | Os01g0191800 | - | Detail |
| CX1g007052 | 1:4,289,403-4,290,346 | - | C1H1g20220 | C2H1g29230 | LOC_Os01g09590 | Os01g0191900 | Os2R_MYB4 | Detail |
| CX1g003235 | 1:4,294,949-4,296,566 | + | - | - | - | - | - | Detail |
| CX1g005789 | 1:4,299,807-4,300,043 | - | - | - | - | Os07g0616100 | - | Detail |
| CX1g001237 | 1:4,307,415-4,308,593 | - | - | C2H1g26016 | LOC_Os01g09620 | Os01g0192000 | - | Detail |
| CX1g003070 | 1:4,323,396-4,323,551 | + | - | - | - | - | - | Detail |
| CX1g000801 | 1:4,331,732-4,333,255 | - | C1H1g28550 | C2H1g07972 | LOC_Os01g09640 | Os01g0192300 | - | Detail |
| CX1g000516 | 1:4,343,622-4,343,870 | + | - | - | - | - | - | Detail |
| CX1g000950 | 1:4,345,649-4,346,466 | + | C1H7g20360 | C2H7g10129 | LOC_Os01g15620 | - | - | Detail |
| CX1g004357 | 1:4,347,558-4,347,761 | + | - | C2H1g22157 | - | - | - | Detail |
| CX1g006171 | 1:4,349,083-4,351,836 | - | C1H1g14238 | C2H1g16065 | LOC_Os01g09670 | Os01g0192600 | - | Detail |
| CX1g005144 | 1:4,370,751-4,372,353 | - | C1H1g03026 | C2H1g05922 | LOC_Os01g09700 | Os01g0192900 | OS-ACS5 | Detail |
| CX1g000453 | 1:4,383,561-4,383,722 | + | - | - | - | Os09g0341901 | - | Detail |
| CX1g001901 | 1:4,397,376-4,398,050 | + | C1H1g18015 | C2H1g18028 | LOC_Os01g09720 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |