| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06770 | 2:9,086,090-9,092,576 | - | C1H2g04839 | CX2g020121 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| C2H2g25557 | 2:9,094,416-9,095,481 | + | C1H2g13080 | - | - | - | - | Detail |
| C2H2g12255 | 2:9,097,550-9,100,200 | + | C1H2g13080 | CX2g019862 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| C2H2g07148 | 2:9,111,459-9,118,310 | + | C1H2g20851 | CX2g020679 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| C2H2g16988 | 2:9,123,672-9,124,927 | + | C1H2g27766 | CX2g021332 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| C2H2g25493 | 2:9,125,762-9,131,981 | - | C1H2g18414 | CX2g022654 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g12406 | 2:9,138,853-9,140,072 | + | C1H2g18414 | CX2g022654 | LOC_Os02g17590 | - | - | Detail |
| C2H2g19414 | 2:9,144,370-9,146,293 | + | C1H2g18414 | CX2g022452 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g11418 | 2:9,153,298-9,161,883 | - | C1H2g28570 | CX2g024094 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| C2H2g13253 | 2:9,188,438-9,191,184 | - | C1H2g09318 | CX2g019729 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| C2H2g02640 | 2:9,192,146-9,200,452 | - | C1H2g06211 | CX2g023106 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| C2H2g17601 | 2:9,224,532-9,226,293 | - | - | - | - | - | - | Detail |
| C2H2g21214 | 2:9,227,200-9,234,095 | - | C1H2g04949 | CX2g020993 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| C2H2g16961 | 2:9,244,502-9,246,511 | - | - | - | - | - | - | Detail |
| C2H2g07248 | 2:9,245,242-9,247,742 | + | C1H2g26261 | CX2g020060 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| C2H2g23233 | 2:9,251,488-9,256,684 | + | C1H2g06748 | CX2g023495 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| C2H2g21422 | 2:9,257,574-9,260,172 | - | C1H2g21417 | CX2g019451 | LOC_Os02g17710 | Os02g0277700 | - | Detail |
| C2H2g09294 | 2:9,267,786-9,272,819 | + | C1H2g04601 | CX2g022207 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| C2H2g18932 | 2:9,270,435-9,271,883 | - | - | - | - | Os02g0278450 | - | Detail |
| C2H2g03135 | 2:9,276,565-9,287,809 | - | C1H2g04831 | CX2g024821 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008390 | 10:11,120,162-11,123,666 | + | C1H10g30915 | C2H10g00590 | LOC_Os10g22510 | Os10g0370400 | - | Detail |
| CX10g007603 | 10:11,137,696-11,140,322 | - | C1H10g05520 | C2H10g30523 | LOC_Os10g22560 | Os10g0370700 | - | Detail |
| CX10g007820 | 10:11,144,966-11,161,014 | - | C1H10g05520 | C2H10g09341 | LOC_Os10g22520 | Os10g0370500 | GH5BG | Detail |
| CX10g009410 | 10:11,175,951-11,178,355 | + | C1H10g13891 | C2H10g04809 | LOC_Os10g22590 | Os10g0371000 | OsEXTL | Detail |
| CX10g010211 | 10:11,192,404-11,192,679 | - | - | - | - | - | - | Detail |
| CX10g008995 | 10:11,210,334-11,213,364 | - | C1H10g31182 | C2H10g24482 | LOC_Os10g22720 | Os10g0372700 | - | Detail |
| CX10g008959 | 10:11,213,876-11,214,369 | - | C1H12g09894 | C2H8g28836 | - | - | - | Detail |
| CX10g008160 | 10:11,216,294-11,218,071 | - | C1H10g13092 | C2H10g19058 | - | Os10g0372500 | - | Detail |
| CX10g009068 | 10:11,221,409-11,224,053 | - | C1H10g05935 | C2H10g06192 | LOC_Os10g22700 | Os10g0372300 | - | Detail |
| CX10g009049 | 10:11,225,364-11,225,648 | + | C1H10g20012 | C2H10g13146 | - | - | - | Detail |
| CX10g009029 | 10:11,235,554-11,236,364 | + | C1H10g15576 | C2H10g21655 | LOC_Os10g22750 | Os10g0373400 | - | Detail |
| CX10g009685 | 10:11,271,778-11,273,199 | - | C1H10g13394 | C2H10g23552 | LOC_Os10g22830 | Os10g0374200 | - | Detail |
| CX10g009301 | 10:11,285,126-11,286,071 | + | C1H10g30364 | C2H10g20812 | LOC_Os11g27380 | Os10g0361300 | - | Detail |
| CX10g007818 | 10:11,320,344-11,323,711 | + | C1H10g20308 | C2H10g27736 | LOC_Os10g22860 | Os10g0374600 | - | Detail |
| CX10g008685 | 10:11,336,118-11,339,347 | + | C1H10g23650 | C2H10g20402 | LOC_Os10g22890 | Os10g0375000 | - | Detail |
| CX10g007853 | 10:11,374,172-11,380,978 | + | C1H10g17100 | C2H10g27634 | LOC_Os10g22950 | Os10g0375600 | SCT2 | Detail |
| CX10g009246 | 10:11,383,089-11,386,570 | + | C1H10g28145 | C2H10g01808 | LOC_Os10g22960 | Os10g0375700 | - | Detail |
| CX10g010360 | 10:11,408,873-11,409,022 | + | - | - | - | - | - | Detail |
| CX10g007643 | 10:11,413,930-11,417,121 | + | C1H10g11843 | C2H10g12850 | LOC_Os10g22980 | Os10g0376200 | - | Detail |
| CX10g010614 | 10:11,419,573-11,420,541 | - | - | - | - | - | - | Detail |