| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g22972 | 9:319,742-324,687 | + | C1H9g01741 | CX9g057297 | LOC_Os09g01600 | Os09g0103200 | - | Detail |
| C2H9g16676 | 9:328,751-329,740 | - | - | CX9g056224 | LOC_Os09g01610 | Os09g0103400 | - | Detail |
| C2H9g07969 | 9:332,866-338,494 | + | C1H9g12264 | CX9g055170 | LOC_Os09g01620 | Os09g0103500 | - | Detail |
| C2H9g23774 | 9:340,939-347,729 | - | C1H9g24389 | CX9g055607 | LOC_Os09g01630 | Os09g0103600 | - | Detail |
| C2H9g29883 | 9:352,438-353,571 | + | - | CX9g057259 | LOC_Os09g01640 | Os09g0103700 | - | Detail |
| C2H9g16389 | 9:376,815-377,173 | - | C1H9g20260 | CX9g057224 | - | - | - | Detail |
| C2H9g22729 | 9:378,725-385,026 | + | C1H9g06955 | CX9g055907 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| C2H9g16634 | 9:406,184-412,350 | - | C1H9g22354 | CX9g057376 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| C2H9g14701 | 9:412,420-415,177 | + | C1H9g21586 | - | LOC_Os09g01690 | Os09g0104300 | - | Detail |
| C2H9g10538 | 9:416,660-419,290 | - | - | CX9g056747 | LOC_Os09g01700 | Os09g0104700 | - | Detail |
| C2H9g17453 | 9:446,949-450,853 | - | C1H9g13033 | CX9g054917 | LOC_Os09g01790 | - | - | Detail |
| C2H9g11873 | 9:488,506-491,881 | + | C1H9g15386 | CX9g056345 | - | - | - | Detail |
| C2H9g07049 | 9:540,701-541,678 | - | - | CX9g057727 | LOC_Os09g01960 | Os09g0106700 | - | Detail |
| C2H9g27759 | 9:579,666-579,827 | - | - | CX9g056249 | LOC_Os09g02000 | Os09g0107400 | - | Detail |
| C2H9g16224 | 9:604,424-611,143 | + | C1H9g28229 | CX9g056897 | LOC_Os09g02130 | Os09g0108400 | - | Detail |
| C2H9g00527 | 9:621,532-627,797 | + | C1H9g14656 | CX9g058002 | LOC_Os09g02140 | Os09g0108600 | - | Detail |
| C2H9g13991 | 9:630,539-631,420 | - | - | - | - | - | - | Detail |
| C2H9g03100 | 9:654,975-655,436 | + | - | CX9g056432 | LOC_Os09g02150 | - | - | Detail |
| C2H9g06082 | 9:665,702-671,407 | - | C1H9g00172 | CX9g056152 | LOC_Os09g02170 | Os09g0109500 | - | Detail |
| C2H9g24122 | 9:673,188-673,482 | + | C1H9g18224 | - | LOC_Os09g02180 | Os09g0109600 | OsDSSR1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g010338 | 10:9,132,351-9,134,124 | - | C1H10g02244 | C2H10g19164 | LOC_Os10g18260 | Os10g0327000 | - | Detail |
| CX10g010430 | 10:9,139,730-9,140,949 | - | C1H10g29576 | C2H10g15917 | LOC_Os10g17960 | Os10g0329900 | - | Detail |
| CX10g007275 | 10:9,194,641-9,195,138 | + | C1H10g10577 | C2H10g25098 | LOC_Os10g18340 | Os10g0330000 | - | Detail |
| CX10g007335 | 10:9,223,615-9,224,611 | + | C1H10g06660 | C2H10g19926 | LOC_Os10g18370 | Os10g0330400 | - | Detail |
| CX10g009912 | 10:9,228,742-9,228,894 | - | - | - | - | - | - | Detail |
| CX10g008206 | 10:9,230,101-9,237,164 | + | C1H10g21391 | C2H10g01382 | LOC_Os10g18400 | Os10g0330600 | - | Detail |
| CX10g008737 | 10:9,254,469-9,255,547 | + | C1H10g06005 | C2H10g01542 | LOC_Os10g18430 | Os10g0380100 | OsTHT2 | Detail |
| CX10g007909 | 10:9,269,458-9,270,012 | - | C1H10g16945 | C2H10g18243 | LOC_Os10g18470 | Os10g0331400 | - | Detail |
| CX10g008629 | 10:9,271,863-9,275,746 | - | C1H10g01643 | C2H10g15108 | LOC_Os10g18480 | Os10g0332000 | - | Detail |
| CX10g007605 | 10:9,280,666-9,282,937 | - | C1H10g25068 | C2H10g25078 | LOC_Os10g18510 | Os10g0332000 | - | Detail |
| CX10g008957 | 10:9,287,076-9,290,630 | - | C1H10g03496 | C2H10g25078 | LOC_Os10g18530 | Os10g0332000 | - | Detail |
| CX10g008540 | 10:9,305,628-9,306,319 | - | C1H3g19186 | C2H10g26374 | LOC_Os12g26480 | Os12g0450500 | - | Detail |
| CX10g007966 | 10:9,308,546-9,309,668 | + | C1H10g13961 | C2H10g30573 | LOC_Os10g18760 | Os10g0333700 | - | Detail |
| CX10g010502 | 10:9,328,528-9,328,719 | - | - | - | - | - | - | Detail |
| CX10g009943 | 10:9,330,164-9,331,372 | + | C1H10g21667 | C2H10g24785 | LOC_Os10g18800 | Os10g0335000 | - | Detail |
| CX10g008972 | 10:9,336,201-9,336,434 | + | - | - | - | - | - | Detail |
| CX10g009829 | 10:9,341,238-9,342,415 | - | C1H10g22713 | C2H10g12591 | LOC_Os10g18820 | Os10g0334500 | - | Detail |
| CX10g008806 | 10:9,345,866-9,346,207 | - | - | C2H10g29236 | LOC_Os10g18840 | - | - | Detail |
| CX10g007610 | 10:9,354,482-9,354,664 | + | - | - | - | - | - | Detail |
| CX10g009006 | 10:9,359,669-9,360,782 | + | C1H10g29330 | C2H10g13497 | LOC_Os10g18870 | Os10g0335000 | - | Detail |