| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10836 | 1:28,198,216-28,199,650 | - | C2H1g29811 | CX1g002430 | LOC_Os01g54960 | Os01g0753200 | - | Detail |
| C1H1g16292 | 1:28,200,764-28,202,409 | + | C2H1g20006 | CX1g006340 | LOC_Os01g54969 | Os01g0753300 | OsASMT1 | Detail |
| C1H1g07442 | 1:28,202,676-28,208,745 | - | C2H1g09497 | CX1g002732 | LOC_Os01g54990 | Os01g0753500 | OsARF3lb | Detail |
| C1H1g02806 | 1:28,221,205-28,222,136 | + | C2H1g17359 | CX1g006658 | LOC_Os01g55020 | Os01g0754000 | - | Detail |
| C1H1g16947 | 1:28,224,309-28,226,105 | - | C2H1g07609 | CX1g002933 | LOC_Os01g55030 | Os01g0754100 | - | Detail |
| C1H1g05578 | 1:28,227,601-28,236,955 | - | C2H1g07292 | CX1g005591 | LOC_Os01g55040 | Os01g0754200 | - | Detail |
| C1H1g11544 | 1:28,237,266-28,242,179 | - | C2H1g26542 | CX1g006946 | LOC_Os01g55050 | Os01g0754500 | - | Detail |
| C1H1g27304 | 1:28,273,856-28,282,338 | - | C2H1g25651 | CX1g006404 | LOC_Os01g55094 | Os01g0755100 | - | Detail |
| C1H1g29987 | 1:28,291,077-28,292,504 | + | C2H1g07282 | CX1g000336 | LOC_Os01g55100 | Os01g0755500 | OsPCF7, PCF7 | Detail |
| C1H1g10544 | 1:28,333,028-28,335,537 | - | C2H1g26286 | CX1g005575 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| C1H1g11346 | 1:28,340,031-28,341,059 | - | C2H1g10412 | - | LOC_Os01g55140 | Os01g0756101 | - | Detail |
| C1H1g21888 | 1:28,343,215-28,343,646 | + | C2H1g27103 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C1H1g31515 | 1:28,344,380-28,345,306 | + | C2H1g14895 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C1H1g02918 | 1:28,352,747-28,363,013 | - | C2H1g30168 | CX1g003911 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| C1H1g08295 | 1:28,368,293-28,372,229 | + | C2H1g05126 | CX1g003221 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| C1H1g21813 | 1:28,381,812-28,384,050 | + | C2H1g22597 | CX1g002081 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| C1H1g15032 | 1:28,402,160-28,404,225 | + | C2H1g23299 | CX1g004140 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| C1H1g13228 | 1:28,418,667-28,422,542 | + | C2H1g18562 | CX1g001542 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| C1H1g20677 | 1:28,423,057-28,425,847 | - | C2H1g15915 | CX1g000631 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| C1H1g01435 | 1:28,432,212-28,434,104 | - | C2H1g24400 | CX1g004257 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g010338 | 10:9,132,351-9,134,124 | - | C1H10g02244 | C2H10g19164 | LOC_Os10g18260 | Os10g0327000 | - | Detail |
| CX10g010430 | 10:9,139,730-9,140,949 | - | C1H10g29576 | C2H10g15917 | LOC_Os10g17960 | Os10g0329900 | - | Detail |
| CX10g007275 | 10:9,194,641-9,195,138 | + | C1H10g10577 | C2H10g25098 | LOC_Os10g18340 | Os10g0330000 | - | Detail |
| CX10g007335 | 10:9,223,615-9,224,611 | + | C1H10g06660 | C2H10g19926 | LOC_Os10g18370 | Os10g0330400 | - | Detail |
| CX10g009912 | 10:9,228,742-9,228,894 | - | - | - | - | - | - | Detail |
| CX10g008206 | 10:9,230,101-9,237,164 | + | C1H10g21391 | C2H10g01382 | LOC_Os10g18400 | Os10g0330600 | - | Detail |
| CX10g008737 | 10:9,254,469-9,255,547 | + | C1H10g06005 | C2H10g01542 | LOC_Os10g18430 | Os10g0380100 | OsTHT2 | Detail |
| CX10g007909 | 10:9,269,458-9,270,012 | - | C1H10g16945 | C2H10g18243 | LOC_Os10g18470 | Os10g0331400 | - | Detail |
| CX10g008629 | 10:9,271,863-9,275,746 | - | C1H10g01643 | C2H10g15108 | LOC_Os10g18480 | Os10g0332000 | - | Detail |
| CX10g007605 | 10:9,280,666-9,282,937 | - | C1H10g25068 | C2H10g25078 | LOC_Os10g18510 | Os10g0332000 | - | Detail |
| CX10g008957 | 10:9,287,076-9,290,630 | - | C1H10g03496 | C2H10g25078 | LOC_Os10g18530 | Os10g0332000 | - | Detail |
| CX10g008540 | 10:9,305,628-9,306,319 | - | C1H3g19186 | C2H10g26374 | LOC_Os12g26480 | Os12g0450500 | - | Detail |
| CX10g007966 | 10:9,308,546-9,309,668 | + | C1H10g13961 | C2H10g30573 | LOC_Os10g18760 | Os10g0333700 | - | Detail |
| CX10g010502 | 10:9,328,528-9,328,719 | - | - | - | - | - | - | Detail |
| CX10g009943 | 10:9,330,164-9,331,372 | + | C1H10g21667 | C2H10g24785 | LOC_Os10g18800 | Os10g0335000 | - | Detail |
| CX10g008972 | 10:9,336,201-9,336,434 | + | - | - | - | - | - | Detail |
| CX10g009829 | 10:9,341,238-9,342,415 | - | C1H10g22713 | C2H10g12591 | LOC_Os10g18820 | Os10g0334500 | - | Detail |
| CX10g008806 | 10:9,345,866-9,346,207 | - | - | C2H10g29236 | LOC_Os10g18840 | - | - | Detail |
| CX10g007610 | 10:9,354,482-9,354,664 | + | - | - | - | - | - | Detail |
| CX10g009006 | 10:9,359,669-9,360,782 | + | C1H10g29330 | C2H10g13497 | LOC_Os10g18870 | Os10g0335000 | - | Detail |