| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05791 | 2:29,312,727-29,318,506 | + | C2H2g01003 | CX2g019523 | LOC_Os02g52340 | Os02g0761000 | OsMADS22 | Detail |
| C1H2g08434 | 2:29,322,664-29,326,512 | + | C2H2g29434 | CX2g020420 | LOC_Os02g52360 | Os02g0761100 | - | Detail |
| C1H2g05177 | 2:29,327,293-29,330,629 | - | C2H2g03547 | CX2g022567 | LOC_Os02g52370 | Os02g0761200 | - | Detail |
| C1H2g24424 | 2:29,337,174-29,344,370 | + | C2H2g23284 | CX2g024166 | LOC_Os02g52390 | Os02g0761400 | - | Detail |
| C1H2g28697 | 2:29,346,278-29,349,162 | - | C2H2g11036 | CX2g023443 | LOC_Os02g52410 | Os02g0761600 | - | Detail |
| C1H2g22121 | 2:29,350,238-29,354,480 | - | C2H2g07632 | CX2g023652 | - | Os02g0761700 | - | Detail |
| C1H2g29643 | 2:29,367,517-29,370,525 | - | C2H2g21732 | CX2g024296 | LOC_Os02g52460 | Os02g0762200 | - | Detail |
| C1H2g11756 | 2:29,372,254-29,375,110 | - | C2H2g01308 | CX2g023185 | LOC_Os02g52470 | Os02g0762300 | - | Detail |
| C1H2g24237 | 2:29,391,213-29,392,967 | + | C2H2g06482 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C1H2g04159 | 2:29,405,081-29,413,827 | - | C2H2g29446 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C1H2g10187 | 2:29,420,753-29,421,443 | + | C2H2g11954 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C1H2g21759 | 2:29,433,020-29,433,551 | + | C2H2g00538 | - | - | - | - | Detail |
| C1H2g09761 | 2:29,436,601-29,439,828 | + | C2H2g18956 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C1H2g15844 | 2:29,440,568-29,443,936 | + | C2H2g03175 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C1H2g15324 | 2:29,444,183-29,445,478 | + | C2H2g23310 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C1H2g26295 | 2:29,446,855-29,449,995 | + | C2H2g02605 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C1H2g14291 | 2:29,453,223-29,455,812 | + | C2H2g18172 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C1H2g16896 | 2:29,459,889-29,462,320 | + | C2H2g07475 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C1H2g16728 | 2:29,462,612-29,464,435 | - | C2H2g26785 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C1H2g10581 | 2:29,482,588-29,484,166 | + | C2H2g26543 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002460 | 1:4,060,445-4,062,486 | + | C1H1g07377 | C2H1g05283 | LOC_Os01g09230 | Os01g0187000 | - | Detail |
| CX1g000697 | 1:4,069,559-4,069,714 | + | - | - | - | - | - | Detail |
| CX1g002282 | 1:4,080,844-4,091,837 | + | C1H1g28342 | C2H1g23178 | LOC_Os01g09246 | Os01g0187400 | - | Detail |
| CX1g002953 | 1:4,094,609-4,098,370 | + | C1H1g13448 | C2H1g13013 | LOC_Os01g09252 | Os01g0187500 | - | Detail |
| CX1g004008 | 1:4,102,543-4,105,033 | - | C1H1g18332 | C2H1g05231 | LOC_Os01g09260 | Os01g0187600 | OsCKX1 | Detail |
| CX1g003292 | 1:4,122,554-4,125,988 | - | C1H1g12704 | C2H1g19620 | LOC_Os01g09280 | Os01g0187900 | - | Detail |
| CX1g004066 | 1:4,132,819-4,136,853 | + | C1H1g28219 | C2H1g02695 | LOC_Os01g09300 | Os01g0188100 | - | Detail |
| CX1g002675 | 1:4,137,975-4,143,360 | - | C1H1g06279 | C2H1g02685 | LOC_Os01g09305 | Os01g0188200 | - | Detail |
| CX1g006611 | 1:4,145,203-4,150,228 | - | C1H1g23164 | C2H1g18571 | LOC_Os01g09320 | Os01g0188400 | - | Detail |
| CX1g005693 | 1:4,161,610-4,163,133 | - | - | C2H1g07051 | LOC_Os01g09340 | Os01g0189800 | - | Detail |
| CX1g004426 | 1:4,166,666-4,168,735 | + | C1H1g03578 | C2H1g19316 | LOC_Os01g09430 | Os01g0190000 | - | Detail |
| CX1g005438 | 1:4,170,893-4,171,066 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g006201 | 1:4,182,137-4,183,199 | + | C1H1g27201 | C2H1g02810 | LOC_Os01g09450 | Os01g0190300 | - | Detail |
| CX1g007213 | 1:4,185,056-4,187,556 | - | C1H1g07672 | C2H1g19091 | LOC_Os01g09460 | Os01g0190400 | - | Detail |
| CX1g004108 | 1:4,193,187-4,194,918 | + | C1H1g15113 | C2H1g26000 | LOC_Os01g09470 | Os01g0190500 | GW5L | Detail |
| CX1g004615 | 1:4,198,407-4,198,886 | + | - | - | LOC_Os01g12374 | - | - | Detail |
| CX1g003198 | 1:4,199,519-4,203,066 | + | C1H1g06870 | C2H1g23081 | LOC_Os01g14770 | - | - | Detail |
| CX1g004908 | 1:4,205,618-4,207,021 | + | C1H1g06870 | - | LOC_Os01g14200 | - | - | Detail |
| CX1g002686 | 1:4,224,795-4,225,812 | - | C1H1g00997 | C2H1g13703 | LOC_Os01g09510 | Os01g0191100 | - | Detail |
| CX1g006744 | 1:4,233,143-4,233,316 | + | - | - | - | - | - | Detail |