| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16330 | 3:33,552,540-33,557,647 | + | C2H3g08868 | CX3g030691 | LOC_Os03g64250 | Os03g0860000 | - | Detail |
| C1H3g08606 | 3:33,565,584-33,581,864 | - | C2H3g04480 | CX3g027910 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| C1H3g27781 | 3:33,586,510-33,592,811 | + | C2H3g22239 | CX3g029996 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| C1H3g04412 | 3:33,593,879-33,604,834 | + | C2H3g11459 | CX3g027284 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| C1H3g04119 | 3:33,612,242-33,613,617 | - | C2H3g16452 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C1H3g17429 | 3:33,619,949-33,625,103 | - | C2H3g12472 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C1H3g24824 | 3:33,625,267-33,628,020 | + | C2H3g08959 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C1H3g08341 | 3:33,638,279-33,645,157 | + | C2H3g16629 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C1H4g00861 | 4:16,416-19,947 | + | C2H4g13233 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C1H4g16035 | 4:16,510-18,252 | - | C2H4g12191 | - | - | - | - | Detail |
| C1H4g09455 | 4:39,781-40,005 | - | C2H12g12031 | CX4g034444 | LOC_Os02g17030 | - | - | Detail |
| C1H4g03520 | 4:42,032-50,044 | + | C2H4g17137 | CX4g036339 | LOC_Os08g33280 | - | - | Detail |
| C1H4g00970 | 4:97,742-106,695 | + | C2H4g05647 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C1H4g04170 | 4:108,701-110,550 | - | C2H4g16448 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| C1H4g21331 | 4:124,561-127,342 | + | C2H4g17331 | CX4g033419 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| C1H4g00085 | 4:129,761-132,613 | - | C2H4g10066 | CX4g031572 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| C1H4g29729 | 4:176,858-177,094 | + | C2H4g10312 | - | - | - | - | Detail |
| C1H4g11244 | 4:177,315-182,878 | + | C2H4g18592 | CX4g036467 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| C1H4g30914 | 4:183,184-187,055 | - | C2H4g15768 | CX4g033514 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| C1H4g22444 | 4:188,075-197,428 | - | C2H4g26141 | CX4g035629 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g007944 | 10:7,265,742-7,268,779 | + | C1H10g01112 | C2H10g05603 | LOC_Os10g14814 | Os10g0209300 | - | Detail |
| CX10g008978 | 10:7,270,551-7,270,700 | + | - | - | - | Os07g0616100 | - | Detail |
| CX10g010375 | 10:7,271,887-7,272,312 | - | C1H10g30373 | C2H10g07499 | LOC_Os10g14800 | - | - | Detail |
| CX10g007384 | 10:7,290,522-7,292,309 | + | C1H10g02673 | C2H10g24465 | LOC_Os10g14870 | Os10g0209700 | - | Detail |
| CX10g009494 | 10:7,316,790-7,320,879 | - | C1H10g01646 | C2H10g01041 | LOC_Os10g14920 | Os10g0210500 | - | Detail |
| CX10g010788 | 10:7,350,848-7,351,299 | - | C1H10g15679 | - | - | - | - | Detail |
| CX10g007431 | 10:7,353,321-7,353,485 | + | - | - | - | - | - | Detail |
| CX10g009324 | 10:7,356,930-7,357,176 | - | - | C2H6g25501 | - | - | - | Detail |
| CX10g008032 | 10:7,437,505-7,437,873 | + | - | - | - | - | - | Detail |
| CX10g009404 | 10:7,442,551-7,444,209 | - | - | - | LOC_Os08g27250 | - | - | Detail |
| CX10g010337 | 10:7,444,968-7,445,219 | - | - | - | - | - | - | Detail |
| CX10g009926 | 10:7,456,269-7,456,906 | + | C1H10g02198 | - | - | - | - | Detail |
| CX10g009906 | 10:7,497,959-7,499,904 | + | C1H10g16445 | C2H10g25415 | - | - | - | Detail |
| CX10g008493 | 10:7,502,316-7,503,232 | - | C1H10g17155 | C2H10g17113 | LOC_Os03g27340 | - | - | Detail |
| CX10g009001 | 10:7,504,276-7,504,467 | - | C1H10g17256 | C2H10g15038 | - | - | - | Detail |
| CX10g008863 | 10:7,505,644-7,506,159 | - | C1H10g17256 | - | LOC_Os10g15310 | Os10g0213800 | - | Detail |
| CX10g009370 | 10:7,512,204-7,512,695 | - | C1H10g16382 | C2H10g24673 | LOC_Os10g15300 | Os10g0213700 | - | Detail |
| CX10g009368 | 10:7,539,492-7,539,662 | - | - | - | - | Os07g0137500 | - | Detail |
| CX10g008596 | 10:7,598,468-7,599,153 | - | - | - | - | - | - | Detail |
| CX10g007737 | 10:7,604,152-7,604,745 | - | - | - | LOC_Os07g17100 | - | - | Detail |