| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14118 | 1:32,395,517-32,401,373 | + | C1H1g24327 | CX1g006965 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| C2H1g23902 | 1:32,398,168-32,402,851 | - | C1H1g16353 | CX1g000066 | LOC_Os01g63230 | Os01g0851100 | - | Detail |
| C2H1g01345 | 1:32,406,775-32,409,102 | - | C1H1g19302 | CX1g003216 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| C2H1g07756 | 1:32,420,236-32,424,345 | - | C1H1g13651 | CX1g000616 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| C2H1g20633 | 1:32,434,269-32,440,537 | - | C1H1g15673 | CX1g001220 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| C2H1g02734 | 1:32,446,598-32,449,665 | - | C1H1g03471 | CX1g001145 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| C2H1g20941 | 1:32,450,205-32,454,017 | - | C1H1g05192 | CX1g001502 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| C2H1g02794 | 1:32,471,192-32,473,761 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g02458 | 1:32,475,228-32,475,873 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g22636 | 1:32,481,628-32,483,736 | + | C1H1g31372 | CX1g005825 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| C2H1g00294 | 1:32,484,972-32,486,025 | - | C1H1g22680 | CX1g001333 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| C2H1g03435 | 1:32,498,447-32,502,232 | + | C1H1g21861 | CX1g004784 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| C2H1g21411 | 1:32,510,019-32,510,465 | + | C1H1g01084 | CX1g005287 | - | - | - | Detail |
| C2H1g02642 | 1:32,512,794-32,514,472 | - | C1H1g22221 | CX1g001449 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| C2H1g15087 | 1:32,557,274-32,557,974 | - | C1H1g30766 | CX1g000677 | LOC_Os01g63510 | Os01g0854500 | QHB | Detail |
| C2H1g11964 | 1:32,568,881-32,574,221 | - | C1H1g06653 | CX1g000343 | LOC_Os01g63580 | Os01g0855000 | - | Detail |
| C2H1g08929 | 1:32,583,855-32,589,389 | - | - | - | - | - | - | Detail |
| C2H1g27825 | 1:32,594,203-32,596,288 | + | C1H1g12873 | CX1g005974 | LOC_Os01g63620 | Os01g0855200 | - | Detail |
| C2H1g08166 | 1:32,609,134-32,611,262 | + | C1H1g14003 | CX1g003617 | LOC_Os01g63680 | Os01g0855400 | Os2R_MYB17 | Detail |
| C2H1g04964 | 1:32,624,570-32,628,271 | + | C1H1g14553 | CX1g004920 | LOC_Os01g63710 | Os01g0856000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008444 | 10:5,731,756-5,734,874 | + | C1H10g31560 | C2H10g16034 | LOC_Os10g10880 | Os10g0187701 | - | Detail |
| CX10g007346 | 10:5,744,973-5,746,531 | + | C1H10g22972 | C2H10g19084 | LOC_Os10g10980 | Os10g0188000 | - | Detail |
| CX10g008724 | 10:5,756,632-5,763,798 | - | C1H10g26004 | C2H10g10840 | LOC_Os10g10990 | Os10g0188100 | - | Detail |
| CX10g008938 | 10:5,769,667-5,769,966 | - | - | - | LOC_Os04g06290 | - | - | Detail |
| CX10g008191 | 10:5,772,547-5,773,416 | - | - | - | LOC_Os10g11012 | - | - | Detail |
| CX10g010617 | 10:5,774,798-5,775,229 | - | C1H10g09575 | - | - | Os10g0188250 | - | Detail |
| CX10g008436 | 10:5,779,171-5,785,794 | + | C1H10g12192 | C2H10g29323 | LOC_Os10g11034 | Os10g0188300 | - | Detail |
| CX10g008279 | 10:5,787,517-5,790,931 | + | C1H10g31735 | C2H10g22667 | LOC_Os10g11060 | Os10g0188400 | - | Detail |
| CX10g010368 | 10:5,815,474-5,821,065 | + | C1H10g01544 | C2H10g12048 | LOC_Os10g11110 | Os10g0188900 | - | Detail |
| CX10g008126 | 10:5,843,106-5,850,271 | - | C1H10g16423 | C2H10g17126 | LOC_Os10g11140 | Os10g0189100 | OspPGM | Detail |
| CX10g007547 | 10:5,860,014-5,863,828 | - | C1H10g24284 | C2H10g07771 | LOC_Os10g11200 | Os10g0189600 | - | Detail |
| CX10g010048 | 10:5,870,920-5,871,613 | - | C1H10g04434 | C2H10g19539 | - | Os10g0388500 | - | Detail |
| CX10g007657 | 10:5,876,391-5,880,849 | + | C1H10g15434 | C2H10g07660 | LOC_Os10g11260 | Os10g0190000 | - | Detail |
| CX10g007421 | 10:5,883,508-5,885,622 | - | C1H10g22376 | C2H10g07570 | LOC_Os10g11270 | Os10g0190100 | - | Detail |
| CX10g008494 | 10:5,895,255-5,898,005 | - | C1H10g29738 | C2H10g20628 | LOC_Os10g11310 | Os10g0190500 | - | Detail |
| CX10g010515 | 10:5,910,577-5,913,700 | + | C1H10g29967 | C2H10g01422 | LOC_Os10g11340 | Os10g0190800 | - | Detail |
| CX10g007392 | 10:5,918,854-5,921,350 | + | C1H10g12646 | C2H10g06395 | LOC_Os10g11354 | Os10g0344900 | - | Detail |
| CX10g008556 | 10:5,924,037-5,924,285 | + | - | - | - | - | - | Detail |
| CX10g008056 | 10:5,925,426-5,925,608 | + | - | - | LOC_Os07g10430 | - | - | Detail |
| CX10g007629 | 10:5,945,790-5,947,405 | - | C1H10g11419 | C2H10g14465 | LOC_Os10g11370 | Os10g0191100 | - | Detail |