| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03998 | 1:2,164,077-2,165,131 | - | C1H1g29078 | CX1g003888 | LOC_Os01g05370 | Os01g0144800 | - | Detail |
| C2H1g05408 | 1:2,174,818-2,178,246 | + | C1H1g29078 | CX1g003888 | LOC_Os01g05410 | Os01g0147001 | - | Detail |
| C2H1g08018 | 1:2,185,334-2,189,822 | + | C1H1g18605 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C2H1g25573 | 1:2,191,220-2,194,402 | + | C1H1g08705 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C2H1g12465 | 1:2,194,554-2,196,403 | - | C1H1g07217 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| C2H1g27793 | 1:2,197,356-2,199,409 | - | C1H1g03816 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C2H1g00931 | 1:2,200,826-2,203,456 | - | C1H1g25686 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C2H1g02244 | 1:2,205,153-2,207,498 | - | C1H1g30607 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g25353 | 1:2,210,513-2,219,278 | - | C1H1g11928 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g29480 | 1:2,221,494-2,225,565 | - | C1H1g17304 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C2H1g30066 | 1:2,226,864-2,230,987 | - | C1H1g08404 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C2H1g25150 | 1:2,236,272-2,249,202 | + | C1H1g03903 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C2H1g10498 | 1:2,256,405-2,259,371 | - | C1H1g24472 | CX1g005368 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| C2H1g18971 | 1:2,261,730-2,262,191 | + | C1H1g09766 | CX1g005739 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| C2H1g06791 | 1:2,263,340-2,266,739 | - | C1H1g22469 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C2H1g28846 | 1:2,268,550-2,269,982 | - | C1H1g18521 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C2H1g25044 | 1:2,274,627-2,278,471 | - | C1H1g17924 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C2H1g00511 | 1:2,283,854-2,287,505 | - | C1H1g30008 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C2H1g17834 | 1:2,289,627-2,293,258 | + | C1H1g15806 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C2H1g21300 | 1:2,294,207-2,296,973 | + | C1H1g24721 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004726 | 1:3,896,898-3,900,116 | + | C1H1g05447 | C2H1g11034 | LOC_Os01g08850 | Os01g0184000 | - | Detail |
| CX1g006630 | 1:3,901,128-3,901,628 | - | - | C2H1g10471 | LOC_Os01g08860 | Os01g0184100 | OsHsp18.0, Oshsp18.0-CII | Detail |
| CX1g006276 | 1:3,902,918-3,907,044 | - | C1H1g08258 | C2H1g25930 | LOC_Os01g08930 | Os01g0184500 | - | Detail |
| CX1g005580 | 1:3,913,281-3,914,043 | + | C1H1g29228 | C2H1g18729 | LOC_Os01g08950 | Os01g0184700 | - | Detail |
| CX1g001833 | 1:3,914,445-3,917,119 | - | C1H1g07230 | C2H1g08065 | LOC_Os01g08960 | Os01g0184800 | - | Detail |
| CX1g001927 | 1:3,917,988-3,923,800 | + | C1H1g00754 | C2H1g16483 | LOC_Os01g08970 | Os01g0184900 | - | Detail |
| CX1g006005 | 1:3,925,708-3,929,395 | + | C1H1g18602 | C2H1g08712 | LOC_Os01g08990 | Os01g0185100 | - | Detail |
| CX1g000003 | 1:3,930,875-3,936,555 | - | C1H1g09937 | C2H1g10102 | LOC_Os01g09000 | Os01g0185200 | - | Detail |
| CX1g005455 | 1:3,944,456-3,948,578 | + | C1H1g12656 | C2H1g17955 | LOC_Os01g09010 | Os01g0185300 | - | Detail |
| CX1g004120 | 1:3,950,138-3,955,274 | + | C1H1g03940 | C2H1g17802 | LOC_Os01g09020 | Os01g0185400 | OsCBE1 | Detail |
| CX1g004591 | 1:3,958,948-3,962,569 | + | C1H1g23338 | C2H1g12463 | LOC_Os01g09030 | Os01g0185500 | - | Detail |
| CX1g000928 | 1:3,972,225-3,974,181 | + | C1H1g06268 | C2H1g25484 | LOC_Os01g09080 | Os01g0185900 | - | Detail |
| CX1g005225 | 1:3,975,121-3,975,579 | - | C1H12g13964 | C2H1g20040 | LOC_Os01g13840 | - | - | Detail |
| CX1g004373 | 1:3,975,290-3,976,769 | + | C1H1g22230 | C2H1g16831 | - | - | - | Detail |
| CX1g005539 | 1:3,979,880-3,980,542 | - | C1H1g26932 | C2H1g00345 | LOC_Os01g09100 | Os01g0186000 | WRKY10 | Detail |
| CX1g004425 | 1:3,988,208-3,991,178 | - | C1H1g00047 | C2H1g05521 | LOC_Os01g09120 | Os01g0186200 | - | Detail |
| CX1g002492 | 1:3,993,793-3,994,536 | - | C1H1g15730 | C2H1g16572 | LOC_Os01g09130 | Os01g0186400 | - | Detail |
| CX1g002963 | 1:4,028,738-4,029,364 | + | - | C2H1g25627 | LOC_Os01g09190 | Os01g0186600 | - | Detail |
| CX1g001893 | 1:4,036,319-4,045,151 | - | C1H1g09605 | C2H1g24918 | LOC_Os01g09200 | Os01g0186700 | OsSTK38, TINY1 | Detail |
| CX1g000937 | 1:4,054,867-4,056,225 | + | - | C2H1g06902 | LOC_Os01g09220 | Os01g0186900 | - | Detail |