| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00412 | 1:1,205,291-1,207,738 | + | C2H1g24576 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C1H1g25838 | 1:1,209,203-1,209,889 | + | C2H1g17865 | CX1g002042 | LOC_Os01g03720 | Os01g0127450 | - | Detail |
| C1H1g17663 | 1:1,210,419-1,211,515 | + | C2H1g02319 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C1H1g24827 | 1:1,215,246-1,217,557 | + | C2H1g03781 | CX1g006285 | LOC_Os01g02760 | Os01g0127700 | - | Detail |
| C1H1g05668 | 1:1,217,661-1,218,315 | + | C2H1g03781 | CX1g006285 | LOC_Os01g03690 | Os01g0117400 | - | Detail |
| C1H1g08835 | 1:1,225,922-1,230,986 | + | C2H1g13836 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C1H1g25654 | 1:1,241,292-1,242,522 | - | C2H1g25959 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C1H1g31764 | 1:1,254,615-1,256,427 | - | C2H1g01385 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C1H1g04042 | 1:1,257,095-1,260,002 | + | C2H1g18960 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C1H1g30874 | 1:1,260,240-1,261,552 | - | C2H1g15883 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C1H1g07436 | 1:1,262,139-1,267,477 | - | C2H1g19347 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C1H1g20521 | 1:1,272,265-1,280,309 | + | C2H1g18545 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C1H1g27481 | 1:1,292,873-1,294,279 | + | C2H1g10390 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C1H1g30507 | 1:1,306,551-1,309,571 | - | C2H1g17049 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C1H1g11492 | 1:1,322,229-1,323,238 | + | C2H1g13371 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C1H1g30416 | 1:1,349,867-1,352,853 | - | C2H1g29639 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C1H1g04895 | 1:1,357,467-1,357,897 | - | C2H1g15465 | - | LOC_Os01g03914 | - | - | Detail |
| C1H1g15284 | 1:1,383,194-1,387,792 | + | C2H1g02978 | CX1g003798 | LOC_Os01g03950 | Os01g0130400 | - | Detail |
| C1H1g17044 | 1:1,417,733-1,418,275 | + | C2H1g14763 | - | - | - | - | Detail |
| C1H1g07180 | 1:1,419,589-1,420,156 | + | C2H1g14763 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009470 | 10:5,005,919-5,006,665 | + | - | - | - | - | - | Detail |
| CX10g009464 | 10:5,015,706-5,015,978 | + | C1H3g29683 | C2H3g21076 | - | Os09g0310800 | - | Detail |
| CX10g007292 | 10:5,023,337-5,023,897 | + | C1H10g03698 | C2H10g28710 | LOC_Os10g09760 | Os10g0176300 | - | Detail |
| CX10g007278 | 10:5,047,295-5,047,465 | + | - | - | LOC_Os05g42448 | - | - | Detail |
| CX10g010033 | 10:5,049,281-5,052,944 | - | C1H10g03074 | C2H10g29388 | LOC_Os10g09820 | Os10g0414000 | - | Detail |
| CX10g009911 | 10:5,060,158-5,063,915 | - | C1H10g26135 | C2H10g29003 | LOC_Os10g09850 | Os10g0177200 | OsDSR-1 | Detail |
| CX10g008925 | 10:5,069,036-5,070,469 | - | C1H10g25856 | C2H10g29742 | LOC_Os10g09860 | Os10g0177300 | - | Detail |
| CX10g009427 | 10:5,076,173-5,081,239 | - | C1H10g02711 | C2H10g06766 | LOC_Os10g09870 | Os10g0177400 | - | Detail |
| CX10g007639 | 10:5,091,891-5,092,277 | + | C1H10g29183 | C2H10g08299 | LOC_Os10g09920 | Os10g0178000 | - | Detail |
| CX10g008120 | 10:5,102,524-5,103,236 | + | C1H10g22001 | C2H10g02305 | LOC_Os10g09930 | Os10g0178200 | - | Detail |
| CX10g008513 | 10:5,127,550-5,129,136 | + | C1H10g17317 | C2H10g01921 | LOC_Os10g09990 | Os10g0178500 | - | Detail |
| CX10g008086 | 10:5,143,276-5,143,542 | + | - | - | - | - | - | Detail |
| CX10g010780 | 10:5,147,589-5,152,691 | - | C1H10g11774 | C2H10g02787 | LOC_Os10g10030 | Os10g0178800 | - | Detail |
| CX10g010090 | 10:5,163,267-5,166,474 | - | C1H10g12383 | C2H10g09542 | LOC_Os10g10040 | Os10g0179200 | - | Detail |
| CX10g010486 | 10:5,171,611-5,174,299 | - | C1H10g12383 | C2H10g09542 | LOC_Os10g10050 | Os10g0179200 | - | Detail |
| CX10g008921 | 10:5,196,794-5,199,846 | - | C1H10g27739 | C2H10g29471 | LOC_Os10g10080 | Os10g0180000 | - | Detail |
| CX10g010373 | 10:5,235,893-5,240,519 | - | C1H10g25108 | C2H10g01161 | LOC_Os10g10130 | Os10g0180800 | - | Detail |
| CX10g007396 | 10:5,266,896-5,267,650 | - | C1H10g22151 | - | LOC_Os10g10149 | Os10g0181100 | - | Detail |
| CX10g007775 | 10:5,276,285-5,276,464 | - | - | - | - | - | - | Detail |
| CX10g008767 | 10:5,277,634-5,286,644 | - | C1H10g19539 | C2H10g06101 | LOC_Os10g10170 | Os10g0181200 | - | Detail |