| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30036 | 6:3,511,053-3,511,337 | - | C2H6g25998 | - | - | - | - | Detail |
| C1H6g29216 | 6:3,527,106-3,532,441 | + | C2H6g28335 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C1H6g11123 | 6:3,532,648-3,539,976 | - | C2H6g18941 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C1H6g00515 | 6:3,550,436-3,550,870 | - | C2H6g26636 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C1H6g09185 | 6:3,551,151-3,567,893 | - | C2H6g26382 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C1H6g27595 | 6:3,576,413-3,578,627 | - | C2H6g18991 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C1H6g21452 | 6:3,584,546-3,586,451 | - | C2H6g17059 | CX6g045254 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C1H6g01823 | 6:3,589,061-3,590,512 | - | C2H6g17339 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C1H6g09856 | 6:3,598,244-3,603,345 | - | C2H6g05817 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C1H6g07584 | 6:3,608,593-3,612,106 | + | C2H6g11053 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C1H6g06067 | 6:3,613,742-3,617,783 | - | C2H6g09876 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C1H6g31361 | 6:3,635,848-3,650,218 | + | C2H6g29520 | CX6g044915 | LOC_Os06g08560 | Os06g0184700 | - | Detail |
| C1H6g00502 | 6:3,650,602-3,650,934 | - | C2H6g08005 | CX6g045857 | LOC_Os06g08564 | Os06g0184800 | - | Detail |
| C1H6g26124 | 6:3,652,356-3,653,199 | - | C2H6g00968 | CX6g045857 | - | - | - | Detail |
| C1H6g31492 | 6:3,674,636-3,675,946 | + | C2H6g18987 | CX6g042282 | LOC_Os06g08610 | Os06g0185300 | - | Detail |
| C1H6g28072 | 6:3,711,927-3,715,238 | + | C2H6g15407 | CX6g041869 | LOC_Os06g08670 | Os06g0185900 | - | Detail |
| C1H6g05075 | 6:3,717,143-3,721,670 | + | C2H6g04610 | CX6g044236 | LOC_Os06g08680 | Os06g0186000 | - | Detail |
| C1H6g00841 | 6:3,723,023-3,726,340 | - | C2H6g29401 | CX6g042059 | LOC_Os06g08690 | Os06g0186100 | - | Detail |
| C1H6g04589 | 6:3,730,841-3,734,332 | - | C2H6g15979 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C1H6g03621 | 6:3,738,757-3,744,414 | - | C2H6g07175 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003309 | 1:3,766,362-3,769,753 | - | C1H1g29421 | C2H1g05619 | LOC_Os01g08580 | Os01g0181000 | - | Detail |
| CX1g005635 | 1:3,771,578-3,773,947 | + | C1H1g05943 | C2H1g09388 | LOC_Os01g08650 | Os01g0182100 | - | Detail |
| CX1g000651 | 1:3,779,946-3,780,101 | + | - | - | - | - | - | Detail |
| CX1g002190 | 1:3,781,870-3,783,613 | - | C1H1g28299 | C2H1g25325 | LOC_Os01g08660 | Os01g0182200 | OsSIP1 | Detail |
| CX1g003026 | 1:3,786,332-3,786,865 | - | - | C2H1g14172 | LOC_Os01g08670 | Os01g0182300 | - | Detail |
| CX1g002385 | 1:3,791,447-3,794,858 | - | C1H1g29977 | C2H1g08590 | LOC_Os01g08680 | Os01g0182400 | - | Detail |
| CX1g002667 | 1:3,794,975-3,795,677 | + | C1H1g01569 | C2H1g03691 | LOC_Os01g08690 | Os01g0182500 | - | Detail |
| CX1g006236 | 1:3,798,023-3,804,558 | - | C1H1g31395 | C2H1g22882 | LOC_Os01g08700 | Os01g0182600 | - | Detail |
| CX1g007148 | 1:3,815,826-3,822,959 | - | C1H1g26932 | C2H1g00342 | LOC_Os01g08710 | Os01g0182700 | OsWRKY102 | Detail |
| CX1g003782 | 1:3,828,612-3,846,626 | + | C1H1g19772 | C2H1g11324 | LOC_Os01g08750 | Os01g0182900 | - | Detail |
| CX1g000301 | 1:3,848,886-3,850,742 | + | C1H1g02231 | C2H1g13544 | LOC_Os01g08760 | Os01g0183000 | - | Detail |
| CX1g000793 | 1:3,851,997-3,855,753 | + | C1H1g31443 | C2H1g26288 | LOC_Os01g08770 | Os01g0183100 | - | Detail |
| CX1g007243 | 1:3,856,802-3,861,200 | - | C1H1g26343 | C2H1g17275 | LOC_Os01g08780 | Os01g0183300 | - | Detail |
| CX1g001420 | 1:3,868,884-3,869,645 | + | - | C2H1g04178 | LOC_Os01g08790 | Os01g0183400 | OsNF-YC13 | Detail |
| CX1g000827 | 1:3,870,831-3,872,479 | + | C1H1g28662 | C2H1g06833 | LOC_Os01g08800 | Os01g0183500 | - | Detail |
| CX1g003927 | 1:3,874,485-3,876,011 | + | C1H1g28662 | C2H1g13017 | LOC_Os01g08810 | Os01g0183600 | - | Detail |
| CX1g000642 | 1:3,877,779-3,878,192 | - | C1H1g05359 | C2H1g27975 | LOC_Os01g08814 | Os01g0183633 | - | Detail |
| CX1g003359 | 1:3,882,870-3,884,772 | - | C1H1g07821 | C2H1g27122 | LOC_Os01g08820 | Os01g0218800 | - | Detail |
| CX1g001853 | 1:3,887,760-3,888,812 | + | C1H1g01391 | C2H1g12240 | LOC_Os01g08830 | Os01g0183800 | - | Detail |
| CX1g004917 | 1:3,889,343-3,889,885 | + | C1H1g01391 | C2H1g25026 | LOC_Os01g08840 | Os01g0183850 | - | Detail |