| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18501 | 2:19,164,380-19,165,406 | - | C1H2g27793 | CX2g022789 | LOC_Os02g33790 | - | - | Detail |
| C2H2g01260 | 2:19,165,423-19,165,857 | - | C1H2g08622 | - | - | - | - | Detail |
| C2H2g07033 | 2:19,172,363-19,172,898 | - | C1H2g21560 | CX2g019174 | LOC_Os02g33820 | Os02g0543000 | - | Detail |
| C2H2g22437 | 2:19,175,500-19,178,856 | - | C1H2g07478 | CX2g020648 | LOC_Os02g33830 | Os02g0543100 | - | Detail |
| C2H2g26343 | 2:19,188,625-19,192,497 | + | C1H2g21330 | CX2g023537 | LOC_Os02g33860 | Os02g0543400 | SGW5 | Detail |
| C2H2g00010 | 2:19,210,530-19,213,037 | - | C1H2g10313 | CX2g020736 | LOC_Os02g33890 | Os02g0297200 | - | Detail |
| C2H2g15474 | 2:19,270,010-19,275,300 | - | - | - | - | - | - | Detail |
| C2H2g13315 | 2:19,313,391-19,315,782 | - | C1H11g14205 | CX11g014480 | LOC_Os11g43404 | - | - | Detail |
| C2H2g17047 | 2:19,317,086-19,317,352 | + | C1H1g25728 | - | - | Os03g0578300 | - | Detail |
| C2H2g01626 | 2:19,385,469-19,407,701 | + | C1H2g27639 | CX2g024825 | LOC_Os03g64290 | Os02g0545000 | - | Detail |
| C2H2g18126 | 2:19,448,579-19,448,917 | + | C1H2g31615 | CX2g023067 | - | - | - | Detail |
| C2H2g08974 | 2:19,452,277-19,453,420 | + | - | - | - | Os02g0546400 | - | Detail |
| C2H2g03353 | 2:19,454,809-19,455,564 | - | C1H2g27118 | CX2g021266 | LOC_Os02g34260 | Os02g0546600 | - | Detail |
| C2H2g28913 | 2:19,483,392-19,485,886 | + | C1H2g07807 | CX2g021833 | LOC_Os02g34320 | - | - | Detail |
| C2H2g23048 | 2:19,496,791-19,499,312 | + | C1H2g25374 | CX2g022612 | LOC_Os02g34370 | Os02g0548100 | - | Detail |
| C2H2g01870 | 2:19,500,390-19,501,638 | + | C1H2g22824 | CX2g024786 | - | - | - | Detail |
| C2H2g11085 | 2:19,550,517-19,554,041 | + | C1H2g19067 | CX2g022202 | LOC_Os02g34430 | Os02g0549200 | - | Detail |
| C2H2g12630 | 2:19,560,433-19,562,262 | - | C1H2g22829 | - | - | Os02g0549401 | - | Detail |
| C2H2g30100 | 2:19,567,302-19,569,544 | + | C1H2g16065 | CX2g020503 | LOC_Os02g34460 | Os02g0549600 | - | Detail |
| C2H2g10553 | 2:19,579,625-19,586,051 | + | C1H2g11806 | CX2g019946 | LOC_Os02g34490 | Os02g0549900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008111 | 10:2,805,769-2,806,017 | + | - | - | - | - | - | Detail |
| CX10g008591 | 10:2,837,111-2,838,053 | - | C1H10g00874 | C2H10g18650 | LOC_Os10g05600 | Os10g0146200 | - | Detail |
| CX10g009304 | 10:2,846,542-2,846,751 | - | - | - | LOC_Os10g33950 | - | - | Detail |
| CX10g007407 | 10:2,867,471-2,869,013 | + | C1H10g23527 | C2H10g21335 | LOC_Os10g05660 | Os10g0147200 | - | Detail |
| CX10g007641 | 10:2,874,413-2,874,568 | - | - | - | - | - | - | Detail |
| CX10g009036 | 10:2,874,924-2,877,470 | + | C1H10g16888 | C2H10g09662 | LOC_Os10g02650 | Os10g0147250 | - | Detail |
| CX10g008367 | 10:2,880,935-2,881,090 | + | - | - | - | - | - | Detail |
| CX10g009754 | 10:2,882,824-2,888,398 | - | C1H10g07982 | C2H10g02858 | LOC_Os10g05690 | Os10g0147400 | - | Detail |
| CX10g007469 | 10:2,902,952-2,903,299 | + | C1H10g07248 | C2H10g29283 | LOC_Os10g05720 | Os10g0148000 | OsLTPd11, OsLTP6, OsLtpVI.3, OsDIL, DIL | Detail |
| CX10g008715 | 10:2,904,683-2,906,641 | - | C1H10g18099 | C2H10g14866 | LOC_Os10g05730 | Os10g0147900 | - | Detail |
| CX10g010478 | 10:2,917,110-2,922,368 | - | C1H10g17041 | C2H10g14004 | LOC_Os10g05750 | Os10g0148100 | OsPRP3 | Detail |
| CX10g007907 | 10:2,934,362-2,936,109 | - | C1H10g07673 | C2H10g23042 | LOC_Os10g05780 | Os10g0148400 | - | Detail |
| CX10g008195 | 10:2,946,137-2,954,165 | - | C1H10g25735 | C2H10g08456 | LOC_Os10g05800 | Os10g0148800 | - | Detail |
| CX10g008665 | 10:3,034,024-3,034,873 | + | C1H10g28832 | C2H10g06646 | LOC_Os10g05980 | Os10g0150600 | - | Detail |
| CX10g008891 | 10:3,038,013-3,039,054 | + | C1H10g15553 | C2H10g24053 | LOC_Os10g05990 | Os10g0150700 | - | Detail |
| CX10g009504 | 10:3,047,459-3,048,267 | + | C1H10g09385 | C2H10g24226 | LOC_Os10g06000 | Os10g0150800 | - | Detail |
| CX10g007524 | 10:3,051,519-3,051,701 | + | C1H10g05250 | - | - | - | - | Detail |
| CX10g008090 | 10:3,067,988-3,068,263 | - | - | - | - | - | - | Detail |
| CX10g009700 | 10:3,074,748-3,074,918 | - | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX10g007297 | 10:3,079,388-3,079,585 | - | - | - | - | - | - | Detail |