| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09038 | 4:2,368,447-2,370,528 | - | C2H4g20001 | CX4g036649 | LOC_Os04g06900 | Os04g0152000 | - | Detail |
| C1H4g13377 | 4:2,368,468-2,369,124 | + | C2H4g19138 | - | - | - | - | Detail |
| C1H4g20470 | 4:2,369,690-2,370,555 | + | C2H4g24428 | CX4g033304 | - | Os04g0137550 | - | Detail |
| C1H4g26592 | 4:2,372,045-2,376,221 | - | C2H4g26531 | CX4g033840 | LOC_Os04g06850 | Os04g0152500 | - | Detail |
| C1H4g30768 | 4:2,462,482-2,465,658 | + | C2H4g06170 | CX4g036649 | LOC_Os04g06900 | Os04g0153000 | - | Detail |
| C1H4g02137 | 4:2,473,554-2,475,488 | + | C2H4g17942 | CX4g035962 | LOC_Os04g06840 | Os04g0152400 | - | Detail |
| C1H4g29986 | 4:2,505,361-2,506,881 | + | C2H4g06170 | CX4g036649 | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C1H4g03719 | 4:2,507,006-2,507,837 | + | - | - | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C1H4g30206 | 4:2,646,594-2,646,917 | + | - | CX4g035403 | LOC_Os01g64949 | Os01g0869750 | - | Detail |
| C1H4g27704 | 4:2,647,222-2,650,382 | - | C2H4g30305 | CX4g034065 | LOC_Os01g63380 | Os04g0127900 | - | Detail |
| C1H4g11471 | 4:2,709,370-2,714,460 | + | C2H4g24610 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C1H4g30323 | 4:2,721,108-2,722,316 | + | C2H4g20575 | CX4g031884 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| C1H4g00067 | 4:2,724,345-2,725,017 | - | C2H4g00652 | CX4g033462 | LOC_Os04g07970 | - | - | Detail |
| C1H4g27809 | 4:2,729,942-2,732,320 | + | C2H4g21151 | CX4g033812 | LOC_Os04g09770 | Os04g0161850 | - | Detail |
| C1H4g16605 | 4:2,747,094-2,749,142 | + | C2H4g06170 | CX4g035506 | LOC_Os04g12110 | Os04g0156000 | - | Detail |
| C1H4g23976 | 4:2,752,825-2,754,993 | + | C2H4g17942 | CX4g034341 | LOC_Os04g08200 | Os04g0154800 | - | Detail |
| C1H4g14091 | 4:2,764,324-2,766,127 | + | C2H4g16966 | CX4g033942 | LOC_Os04g07830 | Os04g0155000 | - | Detail |
| C1H4g18551 | 4:2,768,475-2,772,969 | + | C2H4g24610 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C1H4g01636 | 4:2,777,107-2,779,072 | - | C2H4g15311 | CX4g033052 | LOC_Os04g09740 | Os06g0521000 | - | Detail |
| C1H4g01540 | 4:2,922,543-2,925,377 | + | C2H4g06576 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008111 | 10:2,805,769-2,806,017 | + | - | - | - | - | - | Detail |
| CX10g008591 | 10:2,837,111-2,838,053 | - | C1H10g00874 | C2H10g18650 | LOC_Os10g05600 | Os10g0146200 | - | Detail |
| CX10g009304 | 10:2,846,542-2,846,751 | - | - | - | LOC_Os10g33950 | - | - | Detail |
| CX10g007407 | 10:2,867,471-2,869,013 | + | C1H10g23527 | C2H10g21335 | LOC_Os10g05660 | Os10g0147200 | - | Detail |
| CX10g007641 | 10:2,874,413-2,874,568 | - | - | - | - | - | - | Detail |
| CX10g009036 | 10:2,874,924-2,877,470 | + | C1H10g16888 | C2H10g09662 | LOC_Os10g02650 | Os10g0147250 | - | Detail |
| CX10g008367 | 10:2,880,935-2,881,090 | + | - | - | - | - | - | Detail |
| CX10g009754 | 10:2,882,824-2,888,398 | - | C1H10g07982 | C2H10g02858 | LOC_Os10g05690 | Os10g0147400 | - | Detail |
| CX10g007469 | 10:2,902,952-2,903,299 | + | C1H10g07248 | C2H10g29283 | LOC_Os10g05720 | Os10g0148000 | OsLTPd11, OsLTP6, OsLtpVI.3, OsDIL, DIL | Detail |
| CX10g008715 | 10:2,904,683-2,906,641 | - | C1H10g18099 | C2H10g14866 | LOC_Os10g05730 | Os10g0147900 | - | Detail |
| CX10g010478 | 10:2,917,110-2,922,368 | - | C1H10g17041 | C2H10g14004 | LOC_Os10g05750 | Os10g0148100 | OsPRP3 | Detail |
| CX10g007907 | 10:2,934,362-2,936,109 | - | C1H10g07673 | C2H10g23042 | LOC_Os10g05780 | Os10g0148400 | - | Detail |
| CX10g008195 | 10:2,946,137-2,954,165 | - | C1H10g25735 | C2H10g08456 | LOC_Os10g05800 | Os10g0148800 | - | Detail |
| CX10g008665 | 10:3,034,024-3,034,873 | + | C1H10g28832 | C2H10g06646 | LOC_Os10g05980 | Os10g0150600 | - | Detail |
| CX10g008891 | 10:3,038,013-3,039,054 | + | C1H10g15553 | C2H10g24053 | LOC_Os10g05990 | Os10g0150700 | - | Detail |
| CX10g009504 | 10:3,047,459-3,048,267 | + | C1H10g09385 | C2H10g24226 | LOC_Os10g06000 | Os10g0150800 | - | Detail |
| CX10g007524 | 10:3,051,519-3,051,701 | + | C1H10g05250 | - | - | - | - | Detail |
| CX10g008090 | 10:3,067,988-3,068,263 | - | - | - | - | - | - | Detail |
| CX10g009700 | 10:3,074,748-3,074,918 | - | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX10g007297 | 10:3,079,388-3,079,585 | - | - | - | - | - | - | Detail |