| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30216 | 3:5,198,326-5,200,912 | + | C2H3g29021 | CX3g029812 | LOC_Os03g11310 | Os03g0211600 | - | Detail |
| C1H3g24821 | 3:5,203,081-5,207,551 | + | C2H3g25607 | CX3g025107 | LOC_Os03g11320 | Os03g0211700 | - | Detail |
| C1H3g09091 | 3:5,208,685-5,214,433 | - | C2H3g25870 | CX3g030071 | LOC_Os03g11330 | Os03g0211800 | OsGAUT21 | Detail |
| C1H3g01352 | 3:5,220,339-5,224,494 | - | C2H3g12697 | CX3g026293 | LOC_Os03g11340 | Os03g0211900 | - | Detail |
| C1H3g14150 | 3:5,227,713-5,229,179 | + | C2H3g29397 | CX3g028521 | LOC_Os03g11350 | Os03g0212000 | - | Detail |
| C1H3g07134 | 3:5,229,841-5,233,119 | + | C2H3g17554 | CX3g031116 | LOC_Os03g11360 | Os03g0212200 | OsIRL7 | Detail |
| C1H3g30805 | 3:5,234,405-5,235,487 | + | C2H3g15476 | CX3g029879 | LOC_Os03g11370 | Os03g0212300 | - | Detail |
| C1H3g22328 | 3:5,237,173-5,240,298 | + | C2H3g29540 | CX3g030201 | LOC_Os03g11380 | Os03g0212400 | - | Detail |
| C1H3g28284 | 3:5,241,892-5,245,110 | + | C2H3g29934 | CX3g029371 | LOC_Os03g11400 | Os03g0212600 | - | Detail |
| C1H3g04782 | 3:5,246,942-5,251,578 | + | C2H3g06331 | CX3g027354 | LOC_Os03g11410 | Os03g0212700 | - | Detail |
| C1H3g09300 | 3:5,253,184-5,259,217 | - | C2H3g05367 | CX3g026591 | LOC_Os03g11420 | Os03g0212800 | Os3BGlu6 | Detail |
| C1H3g26134 | 3:5,266,966-5,270,560 | + | C2H3g18758 | CX3g029450 | LOC_Os03g11440 | Os03g0213100 | - | Detail |
| C1H3g26202 | 3:5,271,256-5,273,614 | + | C2H3g03518 | - | LOC_Os03g11450 | Os03g0213200 | - | Detail |
| C1H3g00805 | 3:5,280,116-5,289,682 | + | C2H3g28632 | CX3g027674 | LOC_Os03g11460 | Os03g0213300 | - | Detail |
| C1H3g03534 | 3:5,292,879-5,312,632 | - | C2H3g29945 | CX3g025181 | LOC_Os03g11470 | Os03g0213400 | - | Detail |
| C1H3g27429 | 3:5,315,196-5,315,696 | + | C2H3g00399 | CX3g027089 | LOC_Os03g11480 | Os03g0213500 | - | Detail |
| C1H3g11525 | 3:5,317,776-5,320,466 | + | C2H3g08162 | - | LOC_Os03g11490 | Os03g0213600 | - | Detail |
| C1H3g03448 | 3:5,320,489-5,326,565 | + | C2H3g01931 | CX3g025839 | LOC_Os03g11490 | Os03g0213600 | - | Detail |
| C1H3g09548 | 3:5,326,706-5,331,818 | - | C2H3g20966 | CX3g025219 | LOC_Os03g11500 | Os03g0213700 | - | Detail |
| C1H3g26492 | 3:5,332,558-5,335,923 | - | C2H3g14083 | CX3g031080 | LOC_Os03g11510 | Os03g0213800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008111 | 10:2,805,769-2,806,017 | + | - | - | - | - | - | Detail |
| CX10g008591 | 10:2,837,111-2,838,053 | - | C1H10g00874 | C2H10g18650 | LOC_Os10g05600 | Os10g0146200 | - | Detail |
| CX10g009304 | 10:2,846,542-2,846,751 | - | - | - | LOC_Os10g33950 | - | - | Detail |
| CX10g007407 | 10:2,867,471-2,869,013 | + | C1H10g23527 | C2H10g21335 | LOC_Os10g05660 | Os10g0147200 | - | Detail |
| CX10g007641 | 10:2,874,413-2,874,568 | - | - | - | - | - | - | Detail |
| CX10g009036 | 10:2,874,924-2,877,470 | + | C1H10g16888 | C2H10g09662 | LOC_Os10g02650 | Os10g0147250 | - | Detail |
| CX10g008367 | 10:2,880,935-2,881,090 | + | - | - | - | - | - | Detail |
| CX10g009754 | 10:2,882,824-2,888,398 | - | C1H10g07982 | C2H10g02858 | LOC_Os10g05690 | Os10g0147400 | - | Detail |
| CX10g007469 | 10:2,902,952-2,903,299 | + | C1H10g07248 | C2H10g29283 | LOC_Os10g05720 | Os10g0148000 | OsLTPd11, OsLTP6, OsLtpVI.3, OsDIL, DIL | Detail |
| CX10g008715 | 10:2,904,683-2,906,641 | - | C1H10g18099 | C2H10g14866 | LOC_Os10g05730 | Os10g0147900 | - | Detail |
| CX10g010478 | 10:2,917,110-2,922,368 | - | C1H10g17041 | C2H10g14004 | LOC_Os10g05750 | Os10g0148100 | OsPRP3 | Detail |
| CX10g007907 | 10:2,934,362-2,936,109 | - | C1H10g07673 | C2H10g23042 | LOC_Os10g05780 | Os10g0148400 | - | Detail |
| CX10g008195 | 10:2,946,137-2,954,165 | - | C1H10g25735 | C2H10g08456 | LOC_Os10g05800 | Os10g0148800 | - | Detail |
| CX10g008665 | 10:3,034,024-3,034,873 | + | C1H10g28832 | C2H10g06646 | LOC_Os10g05980 | Os10g0150600 | - | Detail |
| CX10g008891 | 10:3,038,013-3,039,054 | + | C1H10g15553 | C2H10g24053 | LOC_Os10g05990 | Os10g0150700 | - | Detail |
| CX10g009504 | 10:3,047,459-3,048,267 | + | C1H10g09385 | C2H10g24226 | LOC_Os10g06000 | Os10g0150800 | - | Detail |
| CX10g007524 | 10:3,051,519-3,051,701 | + | C1H10g05250 | - | - | - | - | Detail |
| CX10g008090 | 10:3,067,988-3,068,263 | - | - | - | - | - | - | Detail |
| CX10g009700 | 10:3,074,748-3,074,918 | - | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX10g007297 | 10:3,079,388-3,079,585 | - | - | - | - | - | - | Detail |