| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17721 | 5:24,162,309-24,165,726 | - | C2H5g08893 | CX5g037640 | LOC_Os05g51420 | Os08g0398400 | OsHIR1, OsHSI1 | Detail |
| C1H5g09746 | 5:24,168,834-24,169,897 | + | C2H5g12015 | - | LOC_Os05g51440 | Os05g0592000 | - | Detail |
| C1H5g13463 | 5:24,170,131-24,173,578 | - | C2H5g20454 | CX5g037130 | LOC_Os05g51450 | Os05g0592100 | AL3, OsClpR1 | Detail |
| C1H5g18064 | 5:24,179,127-24,181,265 | + | C2H5g22532 | CX5g037674 | LOC_Os05g51470 | Os05g0592300 | - | Detail |
| C1H5g29997 | 5:24,183,995-24,184,294 | - | C2H5g07753 | - | LOC_Os04g46270 | - | - | Detail |
| C1H5g01451 | 5:24,184,448-24,184,892 | - | C2H5g11116 | CX5g040049 | - | Os04g0547800 | - | Detail |
| C1H5g21435 | 5:24,185,320-24,200,810 | + | C2H5g07712 | CX5g039347 | LOC_Os05g51480 | Os05g0592400 | - | Detail |
| C1H5g00098 | 5:24,202,938-24,208,839 | - | C2H5g25797 | CX5g041136 | LOC_Os05g51500 | Os05g0592600 | - | Detail |
| C1H5g06239 | 5:24,210,272-24,213,792 | - | C2H5g18379 | CX5g038095 | LOC_Os05g51510 | Os05g0592800 | - | Detail |
| C1H5g06040 | 5:24,217,329-24,223,625 | - | C2H5g13073 | CX5g040640 | LOC_Os05g51520 | Os05g0593000 | - | Detail |
| C1H5g29585 | 5:24,224,922-24,226,117 | - | C2H5g03858 | CX5g039758 | LOC_Os05g51540 | Os05g0593200 | - | Detail |
| C1H5g12721 | 5:24,227,927-24,238,894 | - | C2H5g22607 | CX5g036829 | LOC_Os05g51550 | Os05g0593550 | - | Detail |
| C1H5g11475 | 5:24,240,257-24,240,706 | - | C2H5g18281 | - | - | - | - | Detail |
| C1H5g20997 | 5:24,241,554-24,246,418 | - | C2H5g29211 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C1H5g28104 | 5:24,249,627-24,251,054 | - | C2H5g25800 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C1H5g28669 | 5:24,259,780-24,260,625 | - | C2H5g28633 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C1H5g07980 | 5:24,262,701-24,266,582 | - | C2H5g27012 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C1H5g15566 | 5:24,269,560-24,275,165 | - | C2H5g24138 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C1H5g26110 | 5:24,284,106-24,291,948 | + | C2H5g08909 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C1H5g09316 | 5:24,293,145-24,297,780 | - | C2H5g25499 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008111 | 10:2,805,769-2,806,017 | + | - | - | - | - | - | Detail |
| CX10g008591 | 10:2,837,111-2,838,053 | - | C1H10g00874 | C2H10g18650 | LOC_Os10g05600 | Os10g0146200 | - | Detail |
| CX10g009304 | 10:2,846,542-2,846,751 | - | - | - | LOC_Os10g33950 | - | - | Detail |
| CX10g007407 | 10:2,867,471-2,869,013 | + | C1H10g23527 | C2H10g21335 | LOC_Os10g05660 | Os10g0147200 | - | Detail |
| CX10g007641 | 10:2,874,413-2,874,568 | - | - | - | - | - | - | Detail |
| CX10g009036 | 10:2,874,924-2,877,470 | + | C1H10g16888 | C2H10g09662 | LOC_Os10g02650 | Os10g0147250 | - | Detail |
| CX10g008367 | 10:2,880,935-2,881,090 | + | - | - | - | - | - | Detail |
| CX10g009754 | 10:2,882,824-2,888,398 | - | C1H10g07982 | C2H10g02858 | LOC_Os10g05690 | Os10g0147400 | - | Detail |
| CX10g007469 | 10:2,902,952-2,903,299 | + | C1H10g07248 | C2H10g29283 | LOC_Os10g05720 | Os10g0148000 | OsLTPd11, OsLTP6, OsLtpVI.3, OsDIL, DIL | Detail |
| CX10g008715 | 10:2,904,683-2,906,641 | - | C1H10g18099 | C2H10g14866 | LOC_Os10g05730 | Os10g0147900 | - | Detail |
| CX10g010478 | 10:2,917,110-2,922,368 | - | C1H10g17041 | C2H10g14004 | LOC_Os10g05750 | Os10g0148100 | OsPRP3 | Detail |
| CX10g007907 | 10:2,934,362-2,936,109 | - | C1H10g07673 | C2H10g23042 | LOC_Os10g05780 | Os10g0148400 | - | Detail |
| CX10g008195 | 10:2,946,137-2,954,165 | - | C1H10g25735 | C2H10g08456 | LOC_Os10g05800 | Os10g0148800 | - | Detail |
| CX10g008665 | 10:3,034,024-3,034,873 | + | C1H10g28832 | C2H10g06646 | LOC_Os10g05980 | Os10g0150600 | - | Detail |
| CX10g008891 | 10:3,038,013-3,039,054 | + | C1H10g15553 | C2H10g24053 | LOC_Os10g05990 | Os10g0150700 | - | Detail |
| CX10g009504 | 10:3,047,459-3,048,267 | + | C1H10g09385 | C2H10g24226 | LOC_Os10g06000 | Os10g0150800 | - | Detail |
| CX10g007524 | 10:3,051,519-3,051,701 | + | C1H10g05250 | - | - | - | - | Detail |
| CX10g008090 | 10:3,067,988-3,068,263 | - | - | - | - | - | - | Detail |
| CX10g009700 | 10:3,074,748-3,074,918 | - | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX10g007297 | 10:3,079,388-3,079,585 | - | - | - | - | - | - | Detail |