| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28114 | 9:127,927-128,471 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g14009 | 9:138,087-138,631 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g27378 | 9:148,248-148,792 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g01621 | 9:158,408-158,952 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g09939 | 9:168,569-169,113 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g10841 | 9:222,155-222,469 | + | - | - | - | - | - | Detail |
| C1H9g20378 | 9:225,139-229,991 | - | C2H9g07486 | CX9g055204 | LOC_Os09g01140 | Os09g0100800 | OsGeBP11 | Detail |
| C1H9g29200 | 9:259,419-263,710 | - | C2H9g02141 | CX9g056163 | LOC_Os09g01290 | Os09g0101100 | - | Detail |
| C1H9g04128 | 9:301,326-311,063 | - | C2H9g15899 | CX9g055897 | LOC_Os09g01360 | Os09g0101800 | - | Detail |
| C1H9g17462 | 9:311,725-312,382 | - | C2H9g15899 | CX9g055897 | LOC_Os09g01360 | Os09g0101800 | - | Detail |
| C1H9g17478 | 9:331,713-332,598 | - | - | - | - | - | - | Detail |
| C1H9g27523 | 9:368,464-377,135 | + | C2H9g24411 | CX9g057870 | LOC_Os09g01590 | Os09g0103100 | - | Detail |
| C1H9g01741 | 9:380,162-385,109 | + | C2H9g22972 | CX9g057297 | LOC_Os09g01600 | Os09g0103200 | - | Detail |
| C1H9g12264 | 9:397,300-402,931 | + | C2H9g07969 | CX9g055170 | LOC_Os09g01620 | Os09g0103500 | - | Detail |
| C1H9g24389 | 9:405,379-412,173 | - | C2H9g23774 | CX9g055607 | LOC_Os09g01630 | Os09g0103600 | - | Detail |
| C1H9g06955 | 9:441,136-447,435 | + | C2H9g22729 | CX9g055907 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| C1H9g22354 | 9:471,216-474,715 | - | C2H9g16634 | CX9g057376 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| C1H9g21586 | 9:474,785-477,542 | + | C2H9g14701 | - | LOC_Os09g01690 | Os09g0104300 | - | Detail |
| C1H9g13033 | 9:512,612-515,182 | - | C2H9g17453 | CX9g054917 | LOC_Os09g01790 | - | - | Detail |
| C1H9g05252 | 9:558,682-560,315 | + | C2H9g11873 | CX9g056345 | LOC_Os07g15420 | Os09g0499600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g010595 | 10:1,250,084-1,251,083 | + | C1H10g10692 | - | - | - | - | Detail |
| CX10g010080 | 10:1,260,317-1,261,601 | + | - | - | LOC_Os10g03330 | - | - | Detail |
| CX10g010374 | 10:1,276,229-1,278,368 | + | C1H10g13608 | C2H10g18768 | LOC_Os10g02750 | Os10g0116800 | OsPAP3b | Detail |
| CX10g008270 | 10:1,279,185-1,282,997 | - | C1H10g27318 | C2H10g08029 | LOC_Os10g02760 | Os10g0116900 | - | Detail |
| CX10g008953 | 10:1,293,965-1,297,282 | - | C1H10g16328 | C2H10g20251 | LOC_Os10g02770 | Os10g0117000 | - | Detail |
| CX10g009767 | 10:1,314,991-1,320,810 | + | C1H10g14758 | C2H10g24733 | LOC_Os10g02814 | Os10g0117800 | - | Detail |
| CX10g007864 | 10:1,329,944-1,331,757 | - | C1H10g00752 | C2H10g21212 | LOC_Os10g02880 | Os10g0118000 | - | Detail |
| CX10g007544 | 10:1,340,538-1,340,732 | + | - | - | LOC_Os10g33950 | - | - | Detail |
| CX10g008100 | 10:1,357,455-1,358,160 | - | C1H10g20462 | C2H10g16114 | LOC_Os10g02920 | Os10g0118800 | - | Detail |
| CX10g009573 | 10:1,358,196-1,358,513 | + | - | - | - | - | - | Detail |
| CX10g008253 | 10:1,361,319-1,367,453 | - | C1H10g04762 | C2H10g24574 | LOC_Os10g02930 | Os10g0118900 | OsDNA2_3 | Detail |
| CX10g010413 | 10:1,381,853-1,382,415 | + | C1H10g14661 | C2H10g20096 | - | Os10g0119100 | - | Detail |
| CX10g009694 | 10:1,391,641-1,401,509 | + | C1H10g07695 | C2H10g11469 | LOC_Os10g02980 | Os10g0119300 | - | Detail |
| CX10g009206 | 10:1,406,539-1,410,733 | - | C1H10g14897 | C2H10g23790 | LOC_Os10g02990 | Os10g0119200 | OsLRR-RLK2 | Detail |
| CX10g010168 | 10:1,422,909-1,423,124 | + | - | - | - | Os02g0286933 | - | Detail |
| CX10g010831 | 10:1,490,254-1,490,424 | - | - | - | - | - | - | Detail |
| CX10g007865 | 10:1,493,430-1,495,931 | + | C1H10g16635 | C2H10g07426 | LOC_Os10g03100 | Os10g0120300 | - | Detail |
| CX10g009591 | 10:1,529,556-1,531,838 | + | C1H10g01272 | C2H10g05874 | LOC_Os10g03230 | - | - | Detail |
| CX10g009180 | 10:1,551,380-1,553,752 | + | - | - | LOC_Os10g03060 | - | - | Detail |
| CX10g008171 | 10:1,562,486-1,563,938 | + | C1H10g01643 | C2H10g11474 | LOC_Os10g03320 | Os10g0122000 | - | Detail |