| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g13297 | 2:31,973,476-31,977,782 | - | C2H2g13853 | CX2g024238 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| C1H2g29075 | 2:31,978,855-31,980,586 | - | C2H2g04727 | CX2g021688 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| C1H2g16275 | 2:31,980,829-31,984,851 | + | C2H2g17597 | CX2g019354 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| C1H2g06133 | 2:32,005,288-32,019,239 | + | C2H2g26727 | CX2g021988 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| C1H2g05881 | 2:32,019,844-32,025,170 | + | C2H2g04285 | CX2g019948 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| C1H2g01056 | 2:32,029,789-32,031,205 | + | C2H2g10819 | CX2g024220 | LOC_Os02g57210 | - | - | Detail |
| C1H2g12935 | 2:32,033,715-32,038,823 | - | C2H2g05620 | CX2g024286 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| C1H2g30239 | 2:32,041,152-32,045,439 | + | C2H2g26600 | CX2g021309 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| C1H2g30753 | 2:32,046,841-32,048,533 | - | C2H2g18662 | CX2g020596 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| C1H2g06843 | 2:32,053,365-32,057,301 | - | C2H2g25584 | CX2g019038 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| C1H2g21810 | 2:32,058,151-32,062,839 | - | C2H2g16029 | CX2g019127 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| C1H2g00976 | 2:32,064,428-32,065,835 | + | C2H2g17783 | CX2g024084 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| C1H2g14875 | 2:32,065,361-32,071,544 | - | C2H2g09230 | CX2g022651 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| C1H2g16141 | 2:32,079,194-32,087,198 | - | C2H2g21254 | CX2g023430 | LOC_Os02g57310 | Os02g0818450 | - | Detail |
| C1H2g18181 | 2:32,088,110-32,088,788 | - | C2H2g04028 | CX2g023890 | LOC_Os02g57330 | Os02g0818700 | - | Detail |
| C1H2g27227 | 2:32,091,002-32,092,438 | - | C2H2g04028 | CX2g023890 | LOC_Os02g57330 | Os02g0818700 | - | Detail |
| C1H2g03615 | 2:32,102,212-32,102,979 | + | C2H2g12160 | CX2g022485 | LOC_Os02g57350 | Os02g0818900 | - | Detail |
| C1H2g17025 | 2:32,104,132-32,104,971 | + | C2H2g13224 | CX2g022485 | LOC_Os02g57360 | Os02g0819000 | - | Detail |
| C1H2g23220 | 2:32,105,602-32,106,133 | + | C2H2g13224 | CX2g022485 | LOC_Os02g57360 | Os02g0819000 | - | Detail |
| C1H2g05057 | 2:32,126,459-32,130,114 | + | C2H2g09349 | CX2g023697 | LOC_Os02g57370 | Os02g0819100 | OsDHHC1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004634 | 1:3,605,155-3,606,468 | - | C1H1g05955 | C2H1g02703 | LOC_Os01g08380 | Os01g0179000 | - | Detail |
| CX1g003878 | 1:3,614,292-3,618,180 | + | C1H1g30989 | C2H1g07957 | LOC_Os01g08400 | Os01g0179200 | - | Detail |
| CX1g001124 | 1:3,619,781-3,620,191 | + | C1H1g00147 | C2H1g06451 | - | - | - | Detail |
| CX1g001347 | 1:3,624,971-3,627,239 | + | C1H1g14891 | C2H1g13456 | LOC_Os01g08410 | Os01g0179300 | - | Detail |
| CX1g003881 | 1:3,628,547-3,641,502 | + | C1H1g01282 | C2H1g18435 | LOC_Os01g08420 | Os01g0179400 | SSG4 | Detail |
| CX1g000976 | 1:3,644,531-3,651,008 | + | C1H1g03761 | C2H1g10454 | LOC_Os01g08430 | Os01g0179500 | - | Detail |
| CX1g000280 | 1:3,655,878-3,657,428 | - | C1H1g18226 | C2H1g20314 | LOC_Os01g08440 | Os01g0179600 | - | Detail |
| CX1g005668 | 1:3,662,957-3,666,482 | - | C1H1g03506 | C2H1g26802 | LOC_Os01g08450 | Os01g0179700 | - | Detail |
| CX1g005115 | 1:3,667,997-3,670,760 | - | C1H1g03506 | C2H1g29431 | LOC_Os01g08460 | Os01g0179800 | - | Detail |
| CX1g000517 | 1:3,676,653-3,676,913 | - | C1H1g03506 | C2H1g08311 | LOC_Os01g08464 | Os01g0179901 | - | Detail |
| CX1g007079 | 1:3,679,626-3,681,182 | - | C1H1g12207 | C2H1g21560 | LOC_Os01g08470 | Os01g0180000 | - | Detail |
| CX1g006821 | 1:3,688,163-3,688,375 | + | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g004041 | 1:3,695,225-3,699,581 | - | C1H1g15413 | C2H1g01209 | LOC_Os01g08510 | Os01g0180300 | - | Detail |
| CX1g001675 | 1:3,701,950-3,703,450 | - | C1H1g03096 | C2H1g26851 | LOC_Os01g08520 | Os01g0180400 | - | Detail |
| CX1g007230 | 1:3,717,919-3,718,335 | + | - | - | - | - | - | Detail |
| CX1g005799 | 1:3,722,382-3,722,531 | + | - | - | - | - | - | Detail |
| CX1g004464 | 1:3,723,707-3,733,296 | - | C1H1g26098 | C2H1g00248 | LOC_Os01g08540 | Os01g0180600 | OsMSH7 | Detail |
| CX1g000897 | 1:3,736,734-3,740,993 | - | C1H1g08568 | C2H1g21704 | LOC_Os01g08550 | Os01g0180700 | - | Detail |
| CX1g001317 | 1:3,748,611-3,753,327 | + | - | C2H1g05564 | LOC_Os01g08560 | Os01g0180800 | - | Detail |
| CX1g001824 | 1:3,757,539-3,763,468 | + | C1H1g04959 | C2H1g23466 | LOC_Os01g08570 | Os01g0180900 | PEG1 | Detail |