| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g06309 | 6:7,869,827-7,871,431 | - | C2H6g03633 | CX6g041297 | LOC_Os06g16170 | Os06g0272900 | OsXyBAT5 | Detail |
| C1H6g24810 | 6:7,881,763-7,884,113 | + | C2H6g10725 | CX6g044106 | LOC_Os06g16200 | Os06g0273200 | - | Detail |
| C1H6g17306 | 6:7,892,626-7,893,921 | + | C2H6g14556 | CX6g041716 | LOC_Os06g16240 | Os06g0273500 | OsXyBAT4 | Detail |
| C1H6g00477 | 6:7,910,915-7,915,749 | - | C2H6g20773 | CX6g044070 | LOC_Os06g16260 | Os06g0273800 | - | Detail |
| C1H6g08502 | 6:7,918,022-7,919,566 | + | C2H6g24601 | - | LOC_Os06g16270 | Os06g0274000 | OsHSBP2 | Detail |
| C1H6g27290 | 6:7,921,189-7,935,858 | - | C2H6g12328 | CX6g041389 | LOC_Os06g16280 | Os06g0274100 | - | Detail |
| C1H6g22454 | 6:7,937,891-7,939,984 | + | C2H6g29411 | CX6g041342 | LOC_Os06g16290 | Os06g0274200 | - | Detail |
| C1H6g18150 | 6:7,946,124-7,947,825 | + | C2H6g06933 | CX6g044242 | LOC_Os06g16300 | Os06g0274300 | - | Detail |
| C1H6g11842 | 6:7,958,402-7,966,238 | + | C2H6g23301 | CX6g042085 | LOC_Os06g16330 | Os06g0274500 | OsSERL2 | Detail |
| C1H6g22322 | 6:7,967,759-7,969,743 | - | C2H6g18739 | CX6g044203 | LOC_Os06g16350 | Os06g0274800 | - | Detail |
| C1H6g28161 | 6:7,974,302-7,977,091 | + | C2H6g26801 | CX6g043973 | LOC_Os06g16370 | Os06g0275000 | SE1, Se1(Lm, Lf, Rs, Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, Hd1/OsA, OsCCT21 | Detail |
| C1H6g25706 | 6:7,981,386-7,983,499 | - | C2H6g26383 | - | - | - | - | Detail |
| C1H6g22180 | 6:7,994,210-8,002,603 | + | C2H6g04388 | CX6g042350 | LOC_Os06g16390 | Os06g0275500 | CLF, OsSET24, SDG711, EZ1, OsCLF | Detail |
| C1H6g11424 | 6:8,004,198-8,015,424 | + | C2H6g05369 | CX6g043166 | LOC_Os06g16400 | Os06g0275600 | - | Detail |
| C1H6g04853 | 6:8,015,545-8,020,532 | - | C2H6g15127 | CX6g045943 | LOC_Os06g16410 | Os06g0275700 | - | Detail |
| C1H6g01958 | 6:8,035,270-8,038,178 | + | C2H6g23432 | CX6g044340 | LOC_Os06g16420 | Os06g0275800 | - | Detail |
| C1H6g15789 | 6:8,039,966-8,047,464 | + | C2H6g19168 | CX6g045397 | LOC_Os06g16430 | Os06g0275900 | - | Detail |
| C1H6g04878 | 6:8,178,268-8,180,849 | - | C2H6g13388 | CX6g042959 | LOC_Os06g16640 | Os06g0278000 | - | Detail |
| C1H6g18405 | 6:8,290,588-8,306,425 | - | C2H6g14158 | CX6g045347 | LOC_Os06g16980 | Os06g0281400 | - | Detail |
| C1H6g06414 | 6:8,307,246-8,307,530 | - | C2H6g29390 | CX6g042329 | LOC_Os06g16990 | Os06g0281550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004634 | 1:3,605,155-3,606,468 | - | C1H1g05955 | C2H1g02703 | LOC_Os01g08380 | Os01g0179000 | - | Detail |
| CX1g003878 | 1:3,614,292-3,618,180 | + | C1H1g30989 | C2H1g07957 | LOC_Os01g08400 | Os01g0179200 | - | Detail |
| CX1g001124 | 1:3,619,781-3,620,191 | + | C1H1g00147 | C2H1g06451 | - | - | - | Detail |
| CX1g001347 | 1:3,624,971-3,627,239 | + | C1H1g14891 | C2H1g13456 | LOC_Os01g08410 | Os01g0179300 | - | Detail |
| CX1g003881 | 1:3,628,547-3,641,502 | + | C1H1g01282 | C2H1g18435 | LOC_Os01g08420 | Os01g0179400 | SSG4 | Detail |
| CX1g000976 | 1:3,644,531-3,651,008 | + | C1H1g03761 | C2H1g10454 | LOC_Os01g08430 | Os01g0179500 | - | Detail |
| CX1g000280 | 1:3,655,878-3,657,428 | - | C1H1g18226 | C2H1g20314 | LOC_Os01g08440 | Os01g0179600 | - | Detail |
| CX1g005668 | 1:3,662,957-3,666,482 | - | C1H1g03506 | C2H1g26802 | LOC_Os01g08450 | Os01g0179700 | - | Detail |
| CX1g005115 | 1:3,667,997-3,670,760 | - | C1H1g03506 | C2H1g29431 | LOC_Os01g08460 | Os01g0179800 | - | Detail |
| CX1g000517 | 1:3,676,653-3,676,913 | - | C1H1g03506 | C2H1g08311 | LOC_Os01g08464 | Os01g0179901 | - | Detail |
| CX1g007079 | 1:3,679,626-3,681,182 | - | C1H1g12207 | C2H1g21560 | LOC_Os01g08470 | Os01g0180000 | - | Detail |
| CX1g006821 | 1:3,688,163-3,688,375 | + | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g004041 | 1:3,695,225-3,699,581 | - | C1H1g15413 | C2H1g01209 | LOC_Os01g08510 | Os01g0180300 | - | Detail |
| CX1g001675 | 1:3,701,950-3,703,450 | - | C1H1g03096 | C2H1g26851 | LOC_Os01g08520 | Os01g0180400 | - | Detail |
| CX1g007230 | 1:3,717,919-3,718,335 | + | - | - | - | - | - | Detail |
| CX1g005799 | 1:3,722,382-3,722,531 | + | - | - | - | - | - | Detail |
| CX1g004464 | 1:3,723,707-3,733,296 | - | C1H1g26098 | C2H1g00248 | LOC_Os01g08540 | Os01g0180600 | OsMSH7 | Detail |
| CX1g000897 | 1:3,736,734-3,740,993 | - | C1H1g08568 | C2H1g21704 | LOC_Os01g08550 | Os01g0180700 | - | Detail |
| CX1g001317 | 1:3,748,611-3,753,327 | + | - | C2H1g05564 | LOC_Os01g08560 | Os01g0180800 | - | Detail |
| CX1g001824 | 1:3,757,539-3,763,468 | + | C1H1g04959 | C2H1g23466 | LOC_Os01g08570 | Os01g0180900 | PEG1 | Detail |