| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g04829 | 5:8,657,334-8,659,739 | - | C1H5g29933 | CX5g039511 | LOC_Os05g18850 | Os05g0271300 | - | Detail |
| C2H5g21872 | 5:8,665,923-8,666,663 | - | - | CX5g040978 | - | - | - | Detail |
| C2H5g19418 | 5:8,858,821-8,860,109 | - | - | - | LOC_Os05g18810 | - | - | Detail |
| C2H5g18898 | 5:8,860,892-8,862,608 | - | - | CX5g040099 | LOC_Os05g18810 | - | - | Detail |
| C2H5g06365 | 5:8,882,904-8,887,228 | - | C1H5g21508 | CX5g038788 | LOC_Os05g18790 | Os05g0270800 | - | Detail |
| C2H5g07418 | 5:8,887,310-8,895,747 | + | C1H5g23740 | CX5g038825 | LOC_Os05g18780 | Os05g0270500 | - | Detail |
| C2H5g13254 | 5:8,939,788-8,943,031 | + | C1H5g07422 | CX5g040763 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| C2H5g14736 | 5:8,950,961-8,956,968 | + | C1H5g07422 | CX5g037672 | LOC_Os05g18770 | Os05g0270200 | OsSUN1 | Detail |
| C2H5g22742 | 5:8,963,024-8,965,926 | - | C1H5g12896 | CX5g038173 | LOC_Os05g18750 | Os05g0270000 | - | Detail |
| C2H5g20813 | 5:8,972,271-8,974,091 | - | C1H5g04723 | CX5g040818 | LOC_Os05g19150 | Os05g0273800 | - | Detail |
| C2H5g23596 | 5:8,989,724-8,998,454 | + | C1H5g24613 | CX5g037963 | LOC_Os05g19270 | Os05g0274200 | MSH2, OsMSH2 | Detail |
| C2H5g05262 | 5:9,001,920-9,007,811 | + | C1H5g22471 | CX5g038105 | LOC_Os05g19280 | Os05g0274300 | - | Detail |
| C2H5g00274 | 5:9,025,606-9,027,182 | + | C1H5g09467 | CX5g040495 | LOC_Os05g19370 | Os05g0274900 | - | Detail |
| C2H5g21767 | 5:9,030,414-9,032,795 | - | C1H5g23375 | CX5g040741 | LOC_Os05g19380 | Os05g0275000 | - | Detail |
| C2H5g00793 | 5:9,037,624-9,040,440 | - | C1H5g00832 | CX5g040347 | LOC_Os05g19390 | Os05g0275100 | OsPPR939 | Detail |
| C2H5g14213 | 5:9,044,107-9,044,415 | + | C1H5g06892 | - | LOC_Os05g19470 | - | - | Detail |
| C2H5g02127 | 5:9,045,245-9,050,453 | + | C1H5g06892 | CX5g039057 | - | - | - | Detail |
| C2H5g11590 | 5:9,053,850-9,057,544 | - | C1H5g22556 | - | LOC_Os05g19480 | Os05g0275700 | - | Detail |
| C2H5g17394 | 5:9,067,235-9,068,050 | - | C1H5g01764 | CX5g037198 | - | Os05g0554000 | OsMATE2 | Detail |
| C2H5g02832 | 5:9,084,131-9,086,622 | + | C1H5g03721 | CX5g039415 | LOC_Os05g19500 | Os05g0276100 | OsCHX14 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001384 | 1:38,272,198-38,272,902 | - | C1H1g31840 | C2H1g06471 | - | - | - | Detail |
| CX1g001353 | 1:38,274,419-38,278,026 | + | C1H1g26867 | C2H1g27116 | LOC_Os01g74640 | Os01g0978000 | OsUCP1 | Detail |
| CX1g004874 | 1:38,280,198-38,285,242 | - | C1H1g06588 | C2H1g18952 | LOC_Os01g74650 | Os01g0978100 | - | Detail |
| CX1g002707 | 1:38,292,110-38,293,093 | + | C1H1g16241 | C2H1g23413 | LOC_Os01g74660 | Os01g0978400 | - | Detail |
| CX10g007625 | 10:34,505-46,846 | - | C1H10g10615 | C2H10g10175 | LOC_Os10g01044 | Os10g0100300 | - | Detail |
| CX10g008235 | 10:54,647-60,789 | + | C1H10g12715 | C2H10g03638 | LOC_Os10g01060 | Os10g0100500 | - | Detail |
| CX10g010085 | 10:112,271-112,471 | + | - | - | - | - | - | Detail |
| CX10g008831 | 10:117,326-120,764 | + | - | - | - | Os10g0355800 | - | Detail |
| CX10g010567 | 10:121,592-122,839 | - | - | - | LOC_Os10g21266 | Os10g0355800 | - | Detail |
| CX10g008295 | 10:124,777-125,082 | + | - | - | - | - | - | Detail |
| CX10g010402 | 10:125,730-125,972 | + | - | - | LOC_Os10g38196 | - | - | Detail |
| CX10g009692 | 10:129,632-130,573 | - | C1H10g01786 | C2H10g03040 | LOC_Os10g01080 | Os10g0100700 | OsPDX1.2 | Detail |
| CX10g010378 | 10:151,501-153,909 | + | C1H10g00834 | C2H10g29939 | LOC_Os10g02250 | Os10g0101000 | SDRLK-44 | Detail |
| CX10g008057 | 10:160,396-162,839 | - | C1H10g23663 | C2H10g13492 | LOC_Os10g01110 | Os10g0101100 | - | Detail |
| CX10g009812 | 10:171,496-172,671 | - | C1H10g17975 | C2H10g26137 | LOC_Os10g01134 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| CX10g009382 | 10:199,529-199,828 | - | - | - | - | - | - | Detail |
| CX10g010129 | 10:226,310-227,368 | - | C1H10g10888 | C2H10g06494 | LOC_Os10g01290 | Os10g0102400 | - | Detail |
| CX10g007381 | 10:262,129-263,046 | - | C1H7g28725 | C2H7g20820 | LOC_Os10g03970 | Os08g0496700 | - | Detail |
| CX10g008814 | 10:264,424-270,104 | + | C1H10g10334 | C2H10g14615 | LOC_Os10g01380 | Os10g0102900 | - | Detail |
| CX10g010069 | 10:283,860-286,905 | - | C1H10g06516 | C2H10g02203 | LOC_Os10g06140 | Os10g0103140 | - | Detail |