| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g07063 | 3:32,014,473-32,017,292 | - | C2H3g09845 | CX3g025306 | LOC_Os03g60520 | Os03g0819700 | - | Detail |
| C1H3g11685 | 3:32,019,701-32,022,527 | + | C2H3g16290 | CX3g026585 | LOC_Os03g60530 | Os03g0819900 | - | Detail |
| C1H3g13391 | 3:32,025,181-32,031,630 | + | C2H3g01855 | CX3g025197 | LOC_Os03g60550 | Os03g0820100 | - | Detail |
| C1H3g31889 | 3:32,039,201-32,042,610 | + | C2H3g30643 | CX3g030735 | LOC_Os03g60580 | Os03g0820500 | OsADF3 | Detail |
| C1H3g18878 | 3:32,043,316-32,045,814 | + | C2H3g14030 | CX3g026527 | LOC_Os03g60580 | Os03g0820600 | - | Detail |
| C1H3g26924 | 3:32,046,708-32,050,021 | - | C2H3g06884 | CX3g029295 | LOC_Os03g60600 | Os03g0820700 | - | Detail |
| C1H3g11416 | 3:32,052,032-32,057,089 | - | C2H3g20559 | CX3g025531 | LOC_Os03g60610 | Os03g0820900 | - | Detail |
| C1H3g28279 | 3:32,059,524-32,064,283 | + | C2H3g05607 | CX3g027512 | LOC_Os03g60620 | Os03g0821100 | - | Detail |
| C1H3g25995 | 3:32,068,691-32,070,247 | + | C2H3g25786 | CX3g030377 | LOC_Os03g60630 | Os03g0821200 | - | Detail |
| C1H3g30691 | 3:32,084,735-32,085,068 | - | C2H3g20031 | CX3g029500 | - | - | - | Detail |
| C1H3g24438 | 3:32,086,709-32,090,299 | - | C2H3g23674 | CX3g027662 | LOC_Os03g60650 | Os03g0821300 | - | Detail |
| C1H3g12541 | 3:32,108,813-32,112,023 | - | C2H3g23136 | CX3g026762 | LOC_Os03g60700 | Os03g0821800 | - | Detail |
| C1H3g00836 | 3:32,115,991-32,120,683 | + | C2H3g16650 | CX3g029390 | LOC_Os03g60710 | Os03g0821900 | - | Detail |
| C1H3g22161 | 3:32,122,108-32,122,716 | - | C2H3g05197 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C1H3g30466 | 3:32,123,829-32,124,323 | - | C2H3g28970 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C1H3g30684 | 3:32,140,690-32,142,322 | - | C2H3g26732 | CX3g029250 | LOC_Os03g60740 | Os03g0822200 | - | Detail |
| C1H3g07533 | 3:32,143,169-32,147,768 | + | C2H3g00930 | CX3g030322 | LOC_Os03g60760 | Os03g0822400 | - | Detail |
| C1H3g08406 | 3:32,149,305-32,152,350 | + | C2H3g29253 | CX3g026461 | LOC_Os03g60780 | Os03g0822700 | - | Detail |
| C1H3g13457 | 3:32,152,612-32,154,178 | + | C2H3g29318 | CX3g026368 | LOC_Os03g60790 | Os03g0822800 | - | Detail |
| C1H3g01506 | 3:32,154,729-32,158,967 | + | C2H3g15491 | CX3g025072 | LOC_Os03g60800 | Os03g0822900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001384 | 1:38,272,198-38,272,902 | - | C1H1g31840 | C2H1g06471 | - | - | - | Detail |
| CX1g001353 | 1:38,274,419-38,278,026 | + | C1H1g26867 | C2H1g27116 | LOC_Os01g74640 | Os01g0978000 | OsUCP1 | Detail |
| CX1g004874 | 1:38,280,198-38,285,242 | - | C1H1g06588 | C2H1g18952 | LOC_Os01g74650 | Os01g0978100 | - | Detail |
| CX1g002707 | 1:38,292,110-38,293,093 | + | C1H1g16241 | C2H1g23413 | LOC_Os01g74660 | Os01g0978400 | - | Detail |
| CX10g007625 | 10:34,505-46,846 | - | C1H10g10615 | C2H10g10175 | LOC_Os10g01044 | Os10g0100300 | - | Detail |
| CX10g008235 | 10:54,647-60,789 | + | C1H10g12715 | C2H10g03638 | LOC_Os10g01060 | Os10g0100500 | - | Detail |
| CX10g010085 | 10:112,271-112,471 | + | - | - | - | - | - | Detail |
| CX10g008831 | 10:117,326-120,764 | + | - | - | - | Os10g0355800 | - | Detail |
| CX10g010567 | 10:121,592-122,839 | - | - | - | LOC_Os10g21266 | Os10g0355800 | - | Detail |
| CX10g008295 | 10:124,777-125,082 | + | - | - | - | - | - | Detail |
| CX10g010402 | 10:125,730-125,972 | + | - | - | LOC_Os10g38196 | - | - | Detail |
| CX10g009692 | 10:129,632-130,573 | - | C1H10g01786 | C2H10g03040 | LOC_Os10g01080 | Os10g0100700 | OsPDX1.2 | Detail |
| CX10g010378 | 10:151,501-153,909 | + | C1H10g00834 | C2H10g29939 | LOC_Os10g02250 | Os10g0101000 | SDRLK-44 | Detail |
| CX10g008057 | 10:160,396-162,839 | - | C1H10g23663 | C2H10g13492 | LOC_Os10g01110 | Os10g0101100 | - | Detail |
| CX10g009812 | 10:171,496-172,671 | - | C1H10g17975 | C2H10g26137 | LOC_Os10g01134 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| CX10g009382 | 10:199,529-199,828 | - | - | - | - | - | - | Detail |
| CX10g010129 | 10:226,310-227,368 | - | C1H10g10888 | C2H10g06494 | LOC_Os10g01290 | Os10g0102400 | - | Detail |
| CX10g007381 | 10:262,129-263,046 | - | C1H7g28725 | C2H7g20820 | LOC_Os10g03970 | Os08g0496700 | - | Detail |
| CX10g008814 | 10:264,424-270,104 | + | C1H10g10334 | C2H10g14615 | LOC_Os10g01380 | Os10g0102900 | - | Detail |
| CX10g010069 | 10:283,860-286,905 | - | C1H10g06516 | C2H10g02203 | LOC_Os10g06140 | Os10g0103140 | - | Detail |