| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02644 | 5:16,248,352-16,248,764 | + | C2H5g17544 | - | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C1H5g06235 | 5:16,251,846-16,259,936 | - | C2H5g09572 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C1H5g07655 | 5:16,273,502-16,276,522 | + | C2H5g14010 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C1H5g16377 | 5:16,292,543-16,298,303 | - | C2H5g30500 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C1H5g29208 | 5:16,299,479-16,300,013 | - | - | - | - | - | - | Detail |
| C1H5g18086 | 5:16,310,502-16,318,701 | + | C2H5g11444 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C1H5g22231 | 5:16,320,596-16,323,884 | - | C2H5g22366 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C1H5g07753 | 5:16,338,372-16,339,250 | - | C2H5g14510 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C1H5g01736 | 5:16,341,816-16,342,366 | - | C2H5g20401 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C1H5g28806 | 5:16,342,750-16,348,841 | - | C2H5g21665 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C1H5g13458 | 5:16,356,139-16,360,666 | - | C2H5g22578 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C1H5g23907 | 5:16,367,482-16,368,533 | + | C2H5g22810 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C1H5g25708 | 5:16,372,134-16,373,574 | + | C2H5g14027 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| C1H5g10361 | 5:16,373,908-16,378,104 | + | C2H5g06598 | CX5g038053 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| C1H5g20921 | 5:16,379,238-16,384,284 | + | C2H5g24418 | CX5g040809 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| C1H5g09074 | 5:16,388,271-16,390,229 | - | C2H5g11844 | CX5g041144 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| C1H5g30333 | 5:16,414,244-16,415,575 | + | C2H5g23232 | CX5g037035 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| C1H5g08005 | 5:16,425,658-16,426,710 | + | C2H5g30472 | CX5g037287 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| C1H5g00588 | 5:16,435,503-16,440,524 | - | C2H5g17136 | CX5g040712 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| C1H5g18824 | 5:16,453,084-16,455,295 | + | C2H5g01676 | CX5g037111 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000299 | 1:37,960,890-37,962,611 | - | C1H1g27707 | C2H1g20906 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| CX1g003601 | 1:37,965,380-37,968,106 | + | C1H1g24776 | C2H1g18524 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| CX1g003985 | 1:37,969,733-37,972,851 | - | C1H1g21855 | C2H1g12108 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| CX1g001229 | 1:37,976,411-37,977,835 | + | C1H1g24112 | C2H1g29254 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| CX1g006897 | 1:37,979,352-37,980,631 | + | C1H1g16044 | C2H1g07849 | LOC_Os01g73990 | Os01g0971500 | - | Detail |
| CX1g006969 | 1:37,983,762-37,986,473 | - | C1H1g29294 | C2H1g06455 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| CX1g003751 | 1:37,988,193-37,989,887 | - | C1H1g11998 | C2H1g02122 | LOC_Os01g60250 | Os01g0355100 | - | Detail |
| CX1g001252 | 1:37,991,627-37,992,882 | - | C1H1g11998 | C2H1g14357 | LOC_Os01g74010 | Os01g0971700 | - | Detail |
| CX1g002155 | 1:37,994,443-37,995,226 | - | C1H1g09458 | C2H1g05837 | LOC_Os01g74020 | Os01g0971800 | OsPCL1, OsLUX | Detail |
| CX1g001256 | 1:37,997,256-38,002,840 | - | C1H1g15323 | C2H1g13899 | LOC_Os01g74030 | Os01g0971900 | - | Detail |
| CX1g000341 | 1:38,008,215-38,008,865 | + | C1H1g17657 | C2H1g21603 | LOC_Os01g74040 | Os01g0972000 | - | Detail |
| CX1g006301 | 1:38,010,606-38,013,423 | - | C1H1g23136 | C2H1g26306 | LOC_Os01g74110 | Os01g0972200 | OsZIP1 | Detail |
| CX1g001721 | 1:38,021,148-38,021,522 | - | C1H1g10192 | - | LOC_Os01g62605 | Os01g0525350 | - | Detail |
| CX1g004511 | 1:38,039,276-38,039,500 | + | C1H1g30844 | C2H1g11166 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| CX1g004641 | 1:38,045,250-38,047,053 | + | C1H1g22544 | C2H1g11458 | LOC_Os01g74140 | Os01g0972800 | - | Detail |
| CX1g002412 | 1:38,047,999-38,050,772 | + | C1H1g11871 | C2H1g01506 | LOC_Os01g74146 | Os01g0972900 | - | Detail |
| CX1g001376 | 1:38,052,611-38,054,599 | + | C1H1g20094 | C2H1g06809 | LOC_Os01g74152 | Os01g0973000 | - | Detail |
| CX1g003191 | 1:38,058,301-38,063,901 | + | C1H1g27251 | C2H1g12274 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| CX1g005022 | 1:38,065,288-38,068,944 | - | C1H1g08383 | C2H1g11159 | LOC_Os01g74170 | Os01g0973200 | - | Detail |
| CX1g001253 | 1:38,069,228-38,075,502 | + | C1H1g08747 | C2H1g11244 | LOC_Os01g74180 | Os01g0973300 | - | Detail |