| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000299 | 1:37,960,890-37,962,611 | - | C1H1g27707 | C2H1g20906 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| CX1g003601 | 1:37,965,380-37,968,106 | + | C1H1g24776 | C2H1g18524 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| CX1g003985 | 1:37,969,733-37,972,851 | - | C1H1g21855 | C2H1g12108 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| CX1g001229 | 1:37,976,411-37,977,835 | + | C1H1g24112 | C2H1g29254 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| CX1g006897 | 1:37,979,352-37,980,631 | + | C1H1g16044 | C2H1g07849 | LOC_Os01g73990 | Os01g0971500 | - | Detail |
| CX1g006969 | 1:37,983,762-37,986,473 | - | C1H1g29294 | C2H1g06455 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| CX1g003751 | 1:37,988,193-37,989,887 | - | C1H1g11998 | C2H1g02122 | LOC_Os01g60250 | Os01g0355100 | - | Detail |
| CX1g001252 | 1:37,991,627-37,992,882 | - | C1H1g11998 | C2H1g14357 | LOC_Os01g74010 | Os01g0971700 | - | Detail |
| CX1g002155 | 1:37,994,443-37,995,226 | - | C1H1g09458 | C2H1g05837 | LOC_Os01g74020 | Os01g0971800 | OsPCL1, OsLUX | Detail |
| CX1g001256 | 1:37,997,256-38,002,840 | - | C1H1g15323 | C2H1g13899 | LOC_Os01g74030 | Os01g0971900 | - | Detail |
| CX1g000341 | 1:38,008,215-38,008,865 | + | C1H1g17657 | C2H1g21603 | LOC_Os01g74040 | Os01g0972000 | - | Detail |
| CX1g006301 | 1:38,010,606-38,013,423 | - | C1H1g23136 | C2H1g26306 | LOC_Os01g74110 | Os01g0972200 | OsZIP1 | Detail |
| CX1g001721 | 1:38,021,148-38,021,522 | - | C1H1g10192 | - | LOC_Os01g62605 | Os01g0525350 | - | Detail |
| CX1g004511 | 1:38,039,276-38,039,500 | + | C1H1g30844 | C2H1g11166 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| CX1g004641 | 1:38,045,250-38,047,053 | + | C1H1g22544 | C2H1g11458 | LOC_Os01g74140 | Os01g0972800 | - | Detail |
| CX1g002412 | 1:38,047,999-38,050,772 | + | C1H1g11871 | C2H1g01506 | LOC_Os01g74146 | Os01g0972900 | - | Detail |
| CX1g001376 | 1:38,052,611-38,054,599 | + | C1H1g20094 | C2H1g06809 | LOC_Os01g74152 | Os01g0973000 | - | Detail |
| CX1g003191 | 1:38,058,301-38,063,901 | + | C1H1g27251 | C2H1g12274 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| CX1g005022 | 1:38,065,288-38,068,944 | - | C1H1g08383 | C2H1g11159 | LOC_Os01g74170 | Os01g0973200 | - | Detail |
| CX1g001253 | 1:38,069,228-38,075,502 | + | C1H1g08747 | C2H1g11244 | LOC_Os01g74180 | Os01g0973300 | - | Detail |