| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g15688 | 4:13,896,547-13,897,079 | - | C1H4g07589 | CX4g032851 | - | - | - | Detail |
| C2H4g22024 | 4:13,900,089-13,901,452 | + | C1H4g08073 | CX4g034059 | LOC_Os04g27860 | Os04g0346100 | - | Detail |
| C2H4g10199 | 4:13,907,898-13,909,896 | + | C1H4g22890 | CX4g036065 | - | Os04g0346800 | - | Detail |
| C2H4g07726 | 4:13,919,132-13,922,896 | - | C1H4g23098 | CX4g036207 | LOC_Os04g27960 | Os04g0346900 | - | Detail |
| C2H4g06173 | 4:13,928,229-13,929,547 | - | C1H4g05778 | CX4g036626 | LOC_Os04g27980 | Os04g0347200 | - | Detail |
| C2H4g25025 | 4:13,938,725-13,942,081 | + | C1H4g08969 | CX4g036238 | LOC_Os04g27990 | Os04g0347400 | - | Detail |
| C2H4g18236 | 4:13,945,140-13,951,887 | + | C1H4g15107 | CX4g033642 | LOC_Os04g28010 | Os04g0347600 | - | Detail |
| C2H4g23758 | 4:13,986,253-13,989,174 | + | C1H4g21081 | CX4g032578 | - | Os04g0470500 | - | Detail |
| C2H4g16562 | 4:14,019,386-14,026,335 | + | C1H4g19418 | CX4g032157 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| C2H4g25578 | 4:14,034,243-14,039,890 | + | C1H4g22332 | CX4g033951 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| C2H4g27022 | 4:14,041,795-14,042,022 | + | - | - | - | - | - | Detail |
| C2H4g20901 | 4:14,042,455-14,046,231 | + | C1H4g13797 | CX4g033086 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| C2H4g08837 | 4:14,046,945-14,050,693 | - | C1H4g24314 | CX4g034188 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| C2H4g13837 | 4:14,061,263-14,068,642 | + | C1H4g16463 | CX4g035633 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| C2H4g14798 | 4:14,073,246-14,076,290 | - | C1H4g18035 | CX4g036157 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| C2H4g14319 | 4:14,084,995-14,087,363 | + | C1H4g07136 | - | LOC_Os04g28120 | Os04g0348600 | - | Detail |
| C2H4g18470 | 4:14,096,490-14,099,680 | + | C1H4g27011 | CX4g035143 | LOC_Os04g28130 | Os04g0348800 | - | Detail |
| C2H4g29280 | 4:14,123,882-14,127,032 | + | C1H4g23299 | - | LOC_Os04g28160 | Os04g0348800 | - | Detail |
| C2H4g00376 | 4:14,134,427-14,137,359 | - | C1H4g18144 | CX4g035408 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| C2H4g26754 | 4:14,140,148-14,142,426 | - | C1H4g07697 | CX4g032516 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003248 | 1:37,856,761-37,857,176 | - | - | - | - | Os01g0967400 | - | Detail |
| CX1g006465 | 1:37,864,380-37,865,163 | - | C1H1g28259 | C2H1g23181 | - | - | - | Detail |
| CX1g002517 | 1:37,871,909-37,872,061 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002939 | 1:37,878,370-37,882,040 | + | C1H1g13352 | C2H1g06230 | LOC_Os01g73670 | Os01g0967800 | - | Detail |
| CX1g005310 | 1:37,883,120-37,886,905 | + | C1H1g07633 | C2H1g07305 | LOC_Os01g73680 | Os01g0967900 | - | Detail |
| CX1g006659 | 1:37,887,646-37,890,788 | - | C1H1g14048 | C2H1g24781 | LOC_Os01g73690 | Os01g0968000 | - | Detail |
| CX1g001860 | 1:37,891,828-37,892,897 | - | C1H1g07671 | C2H1g19836 | LOC_Os01g73700 | Os01g0968100 | - | Detail |
| CX1g001112 | 1:37,895,898-37,897,004 | - | C1H1g25633 | C2H1g12288 | LOC_Os01g73710 | Os01g0968300 | - | Detail |
| CX1g005452 | 1:37,898,299-37,899,374 | + | C1H1g15511 | C2H1g30656 | LOC_Os01g73720 | Os01g0968300 | - | Detail |
| CX1g004852 | 1:37,902,597-37,903,714 | + | C1H1g06129 | C2H1g12190 | LOC_Os01g73730 | Os01g0968400 | - | Detail |
| CX1g005277 | 1:37,904,355-37,914,836 | + | C1H1g20404 | C2H1g06476 | LOC_Os01g73760 | Os01g0968700 | - | Detail |
| CX1g003828 | 1:37,916,243-37,916,908 | + | C1H1g08742 | C2H1g00754 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| CX1g004460 | 1:37,920,344-37,920,562 | - | - | - | - | - | - | Detail |
| CX1g003644 | 1:37,925,463-37,927,014 | - | C1H1g28424 | C2H1g09238 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| CX1g006205 | 1:37,928,129-37,930,927 | - | C1H1g31794 | C2H1g20740 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| CX1g003584 | 1:37,942,651-37,945,625 | + | C1H1g01507 | C2H1g09544 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| CX1g002862 | 1:37,947,872-37,949,168 | + | C1H1g08350 | C2H1g13571 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| CX1g006271 | 1:37,949,879-37,953,306 | - | C1H1g18423 | C2H1g20677 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| CX1g001477 | 1:37,954,492-37,956,724 | - | C1H1g08408 | C2H1g02029 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| CX1g001068 | 1:37,959,071-37,959,310 | + | C1H1g29874 | - | LOC_Os01g73940 | Os01g0971000 | - | Detail |