| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g13173 | 2:29,137,135-29,138,778 | - | C2H2g25167 | CX2g019012 | LOC_Os02g51910 | Os02g0755600 | - | Detail |
| C1H2g00252 | 2:29,146,967-29,148,690 | + | C2H2g08519 | CX2g020923 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| C1H2g13826 | 2:29,152,880-29,153,313 | - | C2H2g01748 | - | LOC_Os02g51950 | Os02g0756100 | OsEPFL2 | Detail |
| C1H2g18356 | 2:29,175,431-29,175,916 | + | C2H2g04860 | CX2g023173 | LOC_Os02g52120 | - | - | Detail |
| C1H2g11994 | 2:29,185,231-29,187,982 | + | C2H2g26225 | CX2g020517 | LOC_Os02g52130 | Os02g0757700 | - | Detail |
| C1H2g23218 | 2:29,192,450-29,194,524 | + | C2H2g03437 | CX2g023574 | LOC_Os02g47480 | Os02g0592600 | - | Detail |
| C1H2g00307 | 2:29,199,940-29,203,787 | - | C2H2g01455 | CX2g020566 | LOC_Os02g52140 | Os02g0757900 | - | Detail |
| C1H2g27632 | 2:29,204,004-29,204,932 | + | C2H2g25477 | CX2g023549 | LOC_Os02g52150 | Os02g0758000 | - | Detail |
| C1H2g13642 | 2:29,207,402-29,214,445 | + | C2H2g06385 | CX2g020363 | LOC_Os02g52160 | Os02g0758100 | - | Detail |
| C1H2g04566 | 2:29,223,417-29,226,535 | + | - | CX2g023225 | - | - | - | Detail |
| C1H2g09312 | 2:29,229,008-29,229,813 | - | C2H2g20568 | CX2g018879 | LOC_Os02g52180 | Os02g0758800 | - | Detail |
| C1H2g17070 | 2:29,236,802-29,238,728 | - | C2H2g15822 | CX2g019685 | LOC_Os02g52190 | Os02g0759000 | OsbHLH048 | Detail |
| C1H2g20944 | 2:29,252,549-29,254,213 | + | C2H2g17235 | CX2g023989 | LOC_Os02g52220 | Os02g0759500 | - | Detail |
| C1H2g18903 | 2:29,261,529-29,264,803 | + | C2H2g04549 | CX2g021992 | LOC_Os02g52230 | Os02g0759700 | - | Detail |
| C1H2g07998 | 2:29,275,610-29,277,668 | + | C2H2g25872 | CX2g019154 | LOC_Os02g52260 | Os02g0759900 | - | Detail |
| C1H2g13404 | 2:29,278,490-29,280,295 | - | C2H2g05401 | CX2g024435 | LOC_Os02g52270 | Os02g0760000 | - | Detail |
| C1H2g19953 | 2:29,283,679-29,293,306 | + | C2H2g07649 | CX2g021307 | LOC_Os02g52280 | Os02g0760200 | - | Detail |
| C1H2g28015 | 2:29,293,922-29,296,001 | - | C2H2g26428 | CX2g021362 | LOC_Os02g52290 | Os02g0760300 | OsFKBP12 | Detail |
| C1H2g13116 | 2:29,298,091-29,299,165 | + | C2H2g12246 | CX2g022268 | LOC_Os02g52300 | Os02g0760400 | - | Detail |
| C1H2g15243 | 2:29,300,045-29,301,904 | - | C2H2g13652 | CX2g020044 | LOC_Os02g52314 | Os02g0760500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003248 | 1:37,856,761-37,857,176 | - | - | - | - | Os01g0967400 | - | Detail |
| CX1g006465 | 1:37,864,380-37,865,163 | - | C1H1g28259 | C2H1g23181 | - | - | - | Detail |
| CX1g002517 | 1:37,871,909-37,872,061 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002939 | 1:37,878,370-37,882,040 | + | C1H1g13352 | C2H1g06230 | LOC_Os01g73670 | Os01g0967800 | - | Detail |
| CX1g005310 | 1:37,883,120-37,886,905 | + | C1H1g07633 | C2H1g07305 | LOC_Os01g73680 | Os01g0967900 | - | Detail |
| CX1g006659 | 1:37,887,646-37,890,788 | - | C1H1g14048 | C2H1g24781 | LOC_Os01g73690 | Os01g0968000 | - | Detail |
| CX1g001860 | 1:37,891,828-37,892,897 | - | C1H1g07671 | C2H1g19836 | LOC_Os01g73700 | Os01g0968100 | - | Detail |
| CX1g001112 | 1:37,895,898-37,897,004 | - | C1H1g25633 | C2H1g12288 | LOC_Os01g73710 | Os01g0968300 | - | Detail |
| CX1g005452 | 1:37,898,299-37,899,374 | + | C1H1g15511 | C2H1g30656 | LOC_Os01g73720 | Os01g0968300 | - | Detail |
| CX1g004852 | 1:37,902,597-37,903,714 | + | C1H1g06129 | C2H1g12190 | LOC_Os01g73730 | Os01g0968400 | - | Detail |
| CX1g005277 | 1:37,904,355-37,914,836 | + | C1H1g20404 | C2H1g06476 | LOC_Os01g73760 | Os01g0968700 | - | Detail |
| CX1g003828 | 1:37,916,243-37,916,908 | + | C1H1g08742 | C2H1g00754 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| CX1g004460 | 1:37,920,344-37,920,562 | - | - | - | - | - | - | Detail |
| CX1g003644 | 1:37,925,463-37,927,014 | - | C1H1g28424 | C2H1g09238 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| CX1g006205 | 1:37,928,129-37,930,927 | - | C1H1g31794 | C2H1g20740 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| CX1g003584 | 1:37,942,651-37,945,625 | + | C1H1g01507 | C2H1g09544 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| CX1g002862 | 1:37,947,872-37,949,168 | + | C1H1g08350 | C2H1g13571 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| CX1g006271 | 1:37,949,879-37,953,306 | - | C1H1g18423 | C2H1g20677 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| CX1g001477 | 1:37,954,492-37,956,724 | - | C1H1g08408 | C2H1g02029 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| CX1g001068 | 1:37,959,071-37,959,310 | + | C1H1g29874 | - | LOC_Os01g73940 | Os01g0971000 | - | Detail |