| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003248 | 1:37,856,761-37,857,176 | - | - | - | - | Os01g0967400 | - | Detail |
| CX1g006465 | 1:37,864,380-37,865,163 | - | C1H1g28259 | C2H1g23181 | - | - | - | Detail |
| CX1g002517 | 1:37,871,909-37,872,061 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002939 | 1:37,878,370-37,882,040 | + | C1H1g13352 | C2H1g06230 | LOC_Os01g73670 | Os01g0967800 | - | Detail |
| CX1g005310 | 1:37,883,120-37,886,905 | + | C1H1g07633 | C2H1g07305 | LOC_Os01g73680 | Os01g0967900 | - | Detail |
| CX1g006659 | 1:37,887,646-37,890,788 | - | C1H1g14048 | C2H1g24781 | LOC_Os01g73690 | Os01g0968000 | - | Detail |
| CX1g001860 | 1:37,891,828-37,892,897 | - | C1H1g07671 | C2H1g19836 | LOC_Os01g73700 | Os01g0968100 | - | Detail |
| CX1g001112 | 1:37,895,898-37,897,004 | - | C1H1g25633 | C2H1g12288 | LOC_Os01g73710 | Os01g0968300 | - | Detail |
| CX1g005452 | 1:37,898,299-37,899,374 | + | C1H1g15511 | C2H1g30656 | LOC_Os01g73720 | Os01g0968300 | - | Detail |
| CX1g004852 | 1:37,902,597-37,903,714 | + | C1H1g06129 | C2H1g12190 | LOC_Os01g73730 | Os01g0968400 | - | Detail |
| CX1g005277 | 1:37,904,355-37,914,836 | + | C1H1g20404 | C2H1g06476 | LOC_Os01g73760 | Os01g0968700 | - | Detail |
| CX1g003828 | 1:37,916,243-37,916,908 | + | C1H1g08742 | C2H1g00754 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| CX1g004460 | 1:37,920,344-37,920,562 | - | - | - | - | - | - | Detail |
| CX1g003644 | 1:37,925,463-37,927,014 | - | C1H1g28424 | C2H1g09238 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| CX1g006205 | 1:37,928,129-37,930,927 | - | C1H1g31794 | C2H1g20740 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| CX1g003584 | 1:37,942,651-37,945,625 | + | C1H1g01507 | C2H1g09544 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| CX1g002862 | 1:37,947,872-37,949,168 | + | C1H1g08350 | C2H1g13571 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| CX1g006271 | 1:37,949,879-37,953,306 | - | C1H1g18423 | C2H1g20677 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| CX1g001477 | 1:37,954,492-37,956,724 | - | C1H1g08408 | C2H1g02029 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| CX1g001068 | 1:37,959,071-37,959,310 | + | C1H1g29874 | - | LOC_Os01g73940 | Os01g0971000 | - | Detail |