| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02942 | 1:30,031,566-30,034,970 | + | C2H1g13385 | CX1g000031 | LOC_Os01g58240 | Os01g0794800 | - | Detail |
| C1H1g25833 | 1:30,032,232-30,036,904 | - | C2H1g21351 | - | - | - | - | Detail |
| C1H1g25653 | 1:30,039,800-30,047,154 | + | C2H1g29117 | CX1g000031 | LOC_Os01g58240 | Os01g0795000 | RSP1 | Detail |
| C1H1g21214 | 1:30,049,868-30,054,395 | + | C2H1g27055 | CX1g000031 | LOC_Os01g58270 | Os01g0795100 | - | Detail |
| C1H1g12866 | 1:30,057,062-30,057,763 | - | - | - | - | - | - | Detail |
| C1H1g23689 | 1:30,059,471-30,062,823 | + | C2H1g17970 | CX1g000031 | LOC_Os01g58280 | Os01g0795200 | - | Detail |
| C1H1g13842 | 1:30,066,199-30,070,778 | + | C2H1g21575 | CX1g000031 | LOC_Os01g58290 | Os01g0795400 | Hwi2 | Detail |
| C1H1g19856 | 1:30,072,039-30,072,287 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795600 | - | Detail |
| C1H1g00284 | 1:30,073,389-30,073,613 | + | C2H1g14294 | - | LOC_Os01g58340 | Os01g0795900 | - | Detail |
| C1H1g24727 | 1:30,080,859-30,081,098 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795900 | - | Detail |
| C1H1g15205 | 1:30,092,878-30,095,404 | + | C2H1g23146 | CX1g003893 | LOC_Os01g58380 | Os01g0796400 | - | Detail |
| C1H1g14537 | 1:30,095,888-30,097,988 | - | C2H1g07599 | CX1g005123 | LOC_Os01g58390 | Os01g0796500 | - | Detail |
| C1H1g28486 | 1:30,101,988-30,106,936 | - | C2H1g05560 | CX1g003555 | LOC_Os01g58400 | Os01g0796700 | - | Detail |
| C1H1g15191 | 1:30,109,637-30,110,248 | - | C2H1g00808 | - | - | - | - | Detail |
| C1H1g16633 | 1:30,118,323-30,118,856 | + | - | CX1g006863 | - | - | - | Detail |
| C1H1g08851 | 1:30,124,810-30,125,520 | + | C2H1g04740 | CX1g004754 | LOC_Os01g58420 | Os01g0797600 | ERF3, AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2 | Detail |
| C1H1g04740 | 1:30,146,507-30,150,478 | + | C2H1g19057 | CX1g002330 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| C1H1g24753 | 1:30,154,872-30,157,273 | - | C2H1g16159 | CX1g001040 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| C1H1g14458 | 1:30,157,504-30,158,697 | + | C2H1g05286 | CX1g005010 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| C1H1g21828 | 1:30,158,951-30,160,834 | - | C2H1g30085 | CX1g006206 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005676 | 1:37,742,784-37,747,406 | + | C1H1g11491 | C2H1g27888 | LOC_Os01g73460 | Os01g0965500 | - | Detail |
| CX1g002124 | 1:37,751,286-37,753,422 | - | C1H1g28339 | C2H1g22580 | LOC_Os01g73470 | Os01g0965600 | - | Detail |
| CX1g001136 | 1:37,753,620-37,759,868 | + | C1H1g14383 | C2H1g02795 | LOC_Os01g73480 | Os01g0965700 | - | Detail |
| CX1g005127 | 1:37,761,512-37,762,156 | - | - | - | - | - | - | Detail |
| CX1g005377 | 1:37,763,764-37,769,869 | - | C1H1g05530 | C2H1g19024 | LOC_Os01g73500 | Os01g0965900 | - | Detail |
| CX1g005607 | 1:37,772,397-37,776,170 | - | C1H1g24181 | C2H1g03793 | LOC_Os01g73514 | Os01g0966000 | - | Detail |
| CX1g004906 | 1:37,780,199-37,790,028 | + | C1H1g27530 | C2H1g00287 | LOC_Os01g73530 | Os01g0966100 | - | Detail |
| CX1g001939 | 1:37,791,804-37,792,486 | - | C1H1g15049 | C2H1g04276 | LOC_Os01g73540 | Os01g0966200 | - | Detail |
| CX1g000396 | 1:37,792,688-37,795,946 | + | C1H1g11706 | C2H1g21243 | LOC_Os01g73550 | Os01g0966300 | - | Detail |
| CX1g003894 | 1:37,796,707-37,799,501 | - | C1H1g09710 | C2H1g19222 | LOC_Os01g73560 | Os01g0966400 | - | Detail |
| CX1g003991 | 1:37,799,834-37,802,341 | + | C1H1g29113 | C2H1g20215 | LOC_Os01g73570 | Os01g0966500 | - | Detail |
| CX1g002632 | 1:37,804,417-37,808,106 | + | C1H1g18562 | C2H1g12651 | LOC_Os01g73580 | Os01g0966700 | - | Detail |
| CX1g000483 | 1:37,812,465-37,814,572 | - | C1H1g08379 | C2H1g02048 | LOC_Os01g73590 | Os01g0966900 | OsPLT2 | Detail |
| CX1g006281 | 1:37,822,397-37,826,093 | + | C1H1g18562 | C2H1g12651 | LOC_Os01g73580 | Os01g0966700 | - | Detail |
| CX1g005261 | 1:37,830,665-37,832,752 | - | C1H1g08379 | C2H1g02048 | LOC_Os01g73590 | Os01g0966900 | OsPLT2 | Detail |
| CX1g007258 | 1:37,839,565-37,847,057 | + | C1H1g07022 | C2H1g29070 | LOC_Os01g73620 | Os01g0967100 | - | Detail |
| CX1g006418 | 1:37,847,887-37,848,747 | + | C1H1g18920 | C2H1g04197 | LOC_Os01g73630 | Os01g0967200 | - | Detail |
| CX1g000716 | 1:37,852,782-37,853,135 | - | C1H11g24372 | C2H10g13734 | LOC_Os12g03380 | - | - | Detail |
| CX1g005510 | 1:37,853,035-37,853,199 | + | - | - | - | Os01g0781600 | - | Detail |
| CX1g003983 | 1:37,854,272-37,855,033 | + | - | - | LOC_Os01g73640 | Os01g0967300 | OsLCD3 | Detail |