| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28705 | 9:14,082,386-14,085,112 | - | C2H9g16247 | CX9g055538 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| C1H9g16360 | 9:14,099,302-14,100,577 | - | C2H9g04822 | CX9g056281 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| C1H9g13470 | 9:14,117,924-14,118,634 | + | C2H9g27532 | CX9g056428 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| C1H9g14260 | 9:14,127,883-14,129,418 | + | - | CX9g054921 | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| C1H9g26526 | 9:14,132,653-14,133,615 | - | C2H9g21518 | CX9g055449 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| C1H9g30982 | 9:14,135,762-14,136,721 | - | C2H9g21518 | CX9g055140 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| C1H9g04635 | 9:14,144,033-14,149,540 | + | C2H9g30062 | CX9g057536 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| C1H9g15793 | 9:14,151,855-14,155,854 | + | C2H9g07506 | CX9g057089 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| C1H9g14428 | 9:14,163,321-14,164,511 | - | C2H8g02869 | CX9g057237 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| C1H9g07328 | 9:14,175,436-14,180,412 | + | C2H9g21988 | CX9g057315 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| C1H9g05942 | 9:14,189,906-14,193,435 | - | C2H9g18507 | CX9g057565 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| C1H9g07321 | 9:14,215,317-14,217,269 | + | C2H9g27523 | CX9g056155 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C1H9g27020 | 9:14,224,376-14,226,672 | + | C2H9g05118 | CX9g057558 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| C1H9g14254 | 9:14,232,038-14,234,114 | + | C2H9g05118 | CX9g055637 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g19292 | 9:14,236,876-14,238,403 | + | C2H9g27891 | CX9g056052 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g18282 | 9:14,239,677-14,240,501 | + | C2H9g20787 | CX9g056987 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |
| C1H9g17506 | 9:14,243,495-14,245,972 | + | C2H9g22499 | CX9g056678 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| C1H9g21504 | 9:14,249,901-14,251,636 | - | C2H9g09485 | CX9g055800 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| C1H9g04223 | 9:14,253,097-14,255,854 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28470 | Os09g0458300 | - | Detail |
| C1H9g14790 | 9:14,256,571-14,259,265 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001400 | 1:37,630,648-37,633,478 | - | C1H1g24375 | C2H1g19213 | LOC_Os01g73120 | Os01g0962200 | - | Detail |
| CX1g002991 | 1:37,634,749-37,635,624 | + | C1H1g10143 | C2H1g20002 | LOC_Os01g73130 | Os01g0962300 | - | Detail |
| CX1g001063 | 1:37,636,155-37,637,850 | - | C1H1g04050 | C2H1g29126 | LOC_Os01g73140 | Os01g0962400 | - | Detail |
| CX1g000098 | 1:37,638,626-37,641,335 | - | C1H1g12385 | C2H1g16743 | LOC_Os01g73150 | Os01g0962500 | - | Detail |
| CX1g002133 | 1:37,642,089-37,644,266 | - | C1H1g24570 | C2H1g29119 | LOC_Os01g73160 | Os01g0962600 | - | Detail |
| CX1g004177 | 1:37,646,502-37,649,512 | + | C1H1g28549 | C2H1g24930 | LOC_Os01g73170 | Os01g0962700 | - | Detail |
| CX1g005398 | 1:37,657,358-37,658,594 | + | C1H1g28334 | C2H1g06611 | LOC_Os01g73190 | Os01g0962900 | - | Detail |
| CX1g001029 | 1:37,666,069-37,667,142 | + | C1H1g16502 | C2H1g10822 | LOC_Os01g73200 | Os01g0963000 | - | Detail |
| CX1g005229 | 1:37,671,711-37,675,408 | - | C1H1g19469 | C2H1g11735 | LOC_Os01g73230 | Os01g0963300 | - | Detail |
| CX1g003776 | 1:37,674,992-37,676,887 | + | C1H1g18360 | C2H1g04133 | LOC_Os01g73234 | Os01g0963400 | - | Detail |
| CX1g003232 | 1:37,684,275-37,685,344 | + | C1H1g11213 | C2H1g26694 | LOC_Os01g73250 | Os01g0963600 | OsASR6 | Detail |
| CX1g001162 | 1:37,688,038-37,688,208 | - | - | - | - | Os03g0754300 | - | Detail |
| CX1g000535 | 1:37,699,584-37,702,432 | - | C1H1g25703 | C2H1g09158 | LOC_Os01g73300 | Os01g0964000 | - | Detail |
| CX1g004604 | 1:37,703,936-37,705,522 | - | C1H1g07905 | C2H1g15123 | LOC_Os01g73310 | Os01g0964133 | - | Detail |
| CX1g006807 | 1:37,708,792-37,709,028 | - | - | - | - | - | - | Detail |
| CX1g001963 | 1:37,710,573-37,712,133 | - | C1H1g00978 | C2H1g01164 | LOC_Os01g73390 | Os01g0964400 | - | Detail |
| CX1g000839 | 1:37,721,142-37,724,799 | + | C1H1g25082 | C2H1g19739 | LOC_Os01g73410 | Os01g0964800 | - | Detail |
| CX1g001336 | 1:37,725,743-37,726,825 | + | C1H1g00389 | C2H1g15293 | LOC_Os01g73420 | Os01g0964900 | - | Detail |
| CX1g005166 | 1:37,727,703-37,734,684 | - | C1H1g12154 | C2H1g16675 | LOC_Os01g73430 | Os01g0965000 | - | Detail |
| CX1g004759 | 1:37,736,745-37,741,794 | + | C1H1g05495 | C2H1g07581 | LOC_Os01g73450 | Os01g0965400 | YGL8 | Detail |