| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g26095 | 9:15,490,358-15,491,906 | + | C1H9g31713 | CX9g056933 | LOC_Os09g30320 | Os09g0480900 | RA8, OsBURP15 | Detail |
| C2H9g23422 | 9:15,497,544-15,502,471 | + | C1H9g10108 | CX9g055379 | LOC_Os09g30330 | Os09g0481100 | OsSec14-23 | Detail |
| C2H9g10417 | 9:15,504,281-15,507,633 | - | C1H9g06557 | CX9g056359 | LOC_Os09g30350 | Os09g0481300 | - | Detail |
| C2H9g01903 | 9:15,508,807-15,510,006 | - | C1H9g00807 | CX9g057816 | LOC_Os09g30360 | Os09g0481400 | - | Detail |
| C2H9g12150 | 9:15,514,337-15,518,296 | + | C1H9g16162 | CX9g058098 | LOC_Os09g30380 | Os09g0481600 | - | Detail |
| C2H9g21307 | 9:15,520,305-15,525,251 | - | C1H9g22023 | CX9g056255 | LOC_Os09g30400 | Os09g0481700 | - | Detail |
| C2H9g06242 | 9:15,533,715-15,534,615 | - | C1H9g16418 | CX9g057443 | LOC_Os09g30410 | Os09g0481800 | - | Detail |
| C2H9g03249 | 9:15,535,667-15,537,898 | - | C1H9g08594 | CX9g055277 | LOC_Os09g30411 | Os09g0482000 | - | Detail |
| C2H9g27046 | 9:15,538,351-15,541,958 | - | C1H9g12162 | CX9g057628 | LOC_Os09g30412 | Os09g0482600 | - | Detail |
| C2H9g23476 | 9:15,545,113-15,547,876 | + | C1H9g30961 | CX9g058160 | LOC_Os09g30414 | Os09g0482200 | - | Detail |
| C2H9g03595 | 9:15,547,974-15,548,300 | - | C1H9g13750 | - | LOC_Os09g30418 | Os09g0482550 | - | Detail |
| C2H9g12791 | 9:15,549,217-15,552,923 | - | C1H9g11589 | CX9g054954 | LOC_Os09g30412 | Os09g0482600 | - | Detail |
| C2H9g26838 | 9:15,555,382-15,560,698 | - | C1H9g10634 | CX9g055785 | LOC_Os09g30446 | Os09g0482620 | - | Detail |
| C2H9g26700 | 9:15,561,378-15,563,268 | + | - | - | - | - | - | Detail |
| C2H9g24674 | 9:15,563,331-15,567,735 | + | - | - | LOC_Os04g31090 | - | - | Detail |
| C2H9g10815 | 9:15,569,611-15,572,115 | + | C1H9g28362 | CX9g056722 | LOC_Os09g38910 | Os09g0562600 | WAK92, OsWAK92, OsDEES1-L4 | Detail |
| C2H9g10380 | 9:15,577,242-15,582,603 | - | C1H9g19752 | CX9g057954 | LOC_Os09g30458 | Os09g0482660 | - | Detail |
| C2H9g04333 | 9:15,585,062-15,588,186 | - | C1H9g15788 | CX9g057490 | LOC_Os09g30466 | Os09g0482680 | OsaTRZ2 | Detail |
| C2H9g30076 | 9:15,588,872-15,592,865 | - | C1H9g12404 | CX9g057638 | LOC_Os09g30474 | Os09g0482720 | - | Detail |
| C2H9g14515 | 9:15,608,957-15,613,286 | + | C1H9g00782 | CX9g055038 | LOC_Os09g30478 | Os09g0482740 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003578 | 1:37,341,059-37,343,103 | - | C1H1g26957 | C2H1g22289 | LOC_Os01g72530 | Os01g0955100 | OsMSR2 | Detail |
| CX1g005673 | 1:37,348,305-37,348,652 | + | C1H1g07201 | C2H1g14897 | LOC_Os01g72550 | Os01g0955500 | - | Detail |
| CX1g001552 | 1:37,351,201-37,352,448 | + | C1H1g30539 | C2H1g03342 | LOC_Os01g72560 | Os01g0955600 | - | Detail |
| CX1g000933 | 1:37,354,000-37,361,914 | + | C1H1g25568 | C2H1g26218 | LOC_Os01g72570 | Os01g0955700 | OsCLT1 | Detail |
| CX1g002900 | 1:37,385,136-37,386,125 | - | C1H1g27961 | C2H1g15992 | LOC_Os01g72600 | Os01g0956075 | - | Detail |
| CX1g006914 | 1:37,391,153-37,392,380 | - | C1H1g05794 | - | LOC_Os01g72610 | Os01g0956200 | OsXAT7 | Detail |
| CX1g001126 | 1:37,405,546-37,408,338 | + | C1H1g03570 | C2H1g08239 | LOC_Os01g72680 | Os01g0956800 | - | Detail |
| CX1g002101 | 1:37,413,600-37,418,839 | + | C1H1g11358 | C2H1g11887 | LOC_Os01g72690 | Os01g0957000 | OsNADK1 | Detail |
| CX1g001036 | 1:37,419,545-37,423,032 | + | C1H1g11358 | C2H1g11887 | LOC_Os01g72700 | Os01g0957100 | - | Detail |
| CX1g006954 | 1:37,426,966-37,430,289 | + | C1H1g31774 | C2H1g06905 | LOC_Os01g72710 | Os01g0957200 | - | Detail |
| CX1g003670 | 1:37,432,943-37,433,644 | + | C1H1g23724 | - | - | - | - | Detail |
| CX1g003252 | 1:37,446,422-37,453,805 | + | C1H1g25546 | C2H1g22102 | LOC_Os01g72740 | Os01g0957800 | - | Detail |
| CX1g005071 | 1:37,456,410-37,466,814 | + | C1H1g22585 | C2H1g17125 | LOC_Os01g72780 | Os01g0957900 | - | Detail |
| CX1g004960 | 1:37,468,732-37,471,470 | + | C1H1g03012 | C2H1g30473 | LOC_Os01g72790 | Os01g0958000 | - | Detail |
| CX1g006015 | 1:37,473,868-37,476,469 | - | C1H1g15701 | C2H1g28809 | LOC_Os01g72800 | Os01g0958100 | - | Detail |
| CX1g003169 | 1:37,478,625-37,480,007 | + | C1H1g27805 | C2H1g01164 | LOC_Os01g72810 | Os01g0958200 | - | Detail |
| CX1g003953 | 1:37,481,656-37,483,844 | + | C1H1g12147 | C2H1g09202 | LOC_Os01g72820 | Os01g0958400 | - | Detail |
| CX1g003931 | 1:37,488,063-37,493,273 | + | C1H1g06601 | C2H1g09260 | LOC_Os01g72834 | Os01g0958500 | - | Detail |
| CX1g002191 | 1:37,494,685-37,495,187 | - | C1H1g17341 | C2H1g11916 | LOC_Os01g72850 | Os01g0748500 | - | Detail |
| CX1g001374 | 1:37,500,465-37,504,140 | + | C1H1g20872 | C2H1g16622 | LOC_Os01g72860 | Os01g0958700 | - | Detail |