| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27314 | 12:14,600,751-14,601,830 | + | C2H12g22145 | CX12g018657 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| C1H12g20841 | 12:14,623,649-14,624,812 | + | C2H12g01579 | CX12g015667 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| C1H12g25561 | 12:14,625,216-14,632,739 | - | C2H12g20179 | CX12g017740 | LOC_Os12g28100 | Os12g0467300 | - | Detail |
| C1H12g05419 | 12:14,656,717-14,658,252 | + | C2H12g17782 | CX12g016802 | LOC_Os12g28137 | Os12g0467700 | - | Detail |
| C1H12g11838 | 12:14,680,068-14,684,687 | + | C2H12g27812 | CX12g016836 | LOC_Os12g28260 | Os12g0468500 | OsCNGC5 | Detail |
| C1H12g15040 | 12:14,684,727-14,691,144 | - | C2H12g16369 | CX12g017240 | LOC_Os12g28270 | Os12g0468600 | - | Detail |
| C1H12g25201 | 12:14,711,479-14,715,490 | + | C2H12g16438 | CX12g017257 | LOC_Os02g17020 | - | - | Detail |
| C1H12g09824 | 12:14,753,785-14,755,308 | - | C2H12g21911 | CX12g016867 | LOC_Os12g28137 | Os12g0470700 | - | Detail |
| C1H12g26205 | 12:14,778,840-14,781,478 | + | C2H12g19909 | CX12g017176 | LOC_Os06g36530 | - | - | Detail |
| C1H12g15002 | 12:14,783,139-14,784,445 | + | - | CX12g015400 | LOC_Os12g28750 | Os12g0472500 | OsTDL1A, MIL2 | Detail |
| C1H12g10027 | 12:14,784,595-14,785,110 | + | C2H12g20584 | CX12g015400 | LOC_Os12g28750 | Os12g0472500 | OsTDL1A, MIL2 | Detail |
| C1H12g13184 | 12:14,814,251-14,816,653 | - | C2H12g07430 | CX12g015433 | LOC_Os12g28770 | Os12g0472800 | - | Detail |
| C1H12g30300 | 12:14,843,439-14,843,957 | + | C2H12g10117 | CX12g016151 | LOC_Os12g28880 | Os12g0473900 | OsHyPRP45 | Detail |
| C1H12g20263 | 12:14,850,617-14,853,363 | - | C2H12g09065 | CX12g015955 | LOC_Os06g16040 | Os12g0417000 | - | Detail |
| C1H12g28285 | 12:14,927,853-14,930,307 | - | C2H12g28218 | CX12g016814 | LOC_Os12g29220 | Os12g0476200 | SWEET13, OsSWEET13 | Detail |
| C1H12g31115 | 12:14,996,785-14,999,232 | + | C2H12g15425 | CX12g017996 | LOC_Os12g29280 | Os12g0477000 | - | Detail |
| C1H12g21315 | 12:15,007,408-15,009,103 | - | C2H12g01509 | - | - | Os12g0477050 | - | Detail |
| C1H12g07587 | 12:15,019,584-15,020,441 | + | C2H12g12135 | CX12g016621 | LOC_Os12g29330 | Os12g0477400 | - | Detail |
| C1H12g09086 | 12:15,034,406-15,037,712 | - | - | - | - | - | - | Detail |
| C1H12g12648 | 12:15,038,593-15,042,085 | - | C2H12g11395 | CX12g017275 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004833 | 1:3,426,536-3,428,533 | - | C1H1g01247 | C2H1g07226 | LOC_Os01g08120 | Os01g0176300 | - | Detail |
| CX1g005143 | 1:3,431,798-3,436,390 | + | C1H1g22640 | C2H1g17877 | LOC_Os01g08130 | Os01g0176400 | - | Detail |
| CX1g005306 | 1:3,436,867-3,439,820 | - | C1H1g06103 | C2H1g05536 | LOC_Os01g08150 | Os01g0176500 | - | Detail |
| CX1g003794 | 1:3,451,256-3,453,127 | - | C1H4g04023 | - | - | - | - | Detail |
| CX1g006352 | 1:3,455,671-3,457,542 | + | C1H1g03923 | C2H1g25065 | LOC_Os01g08160 | Os01g0176700 | - | Detail |
| CX1g002845 | 1:3,461,228-3,464,503 | + | - | C2H1g28512 | LOC_Os01g08170 | Os01g0176800 | - | Detail |
| CX1g004627 | 1:3,476,785-3,484,554 | + | C1H1g14865 | C2H1g26258 | LOC_Os01g08190 | Os01g0177100 | - | Detail |
| CX1g003518 | 1:3,486,896-3,495,257 | + | C1H1g25960 | C2H1g16195 | LOC_Os01g08200 | Os01g0177200 | - | Detail |
| CX1g003748 | 1:3,504,580-3,505,816 | - | C1H1g22558 | C2H1g03295 | LOC_Os01g08220 | Os01g0177400 | D18, d18-h (d18-I, d18h), dwf15, d25, d18, d18-k, d18-AD, d18-dy, OsGA3ox2, ga3ox2, OsGA3OX2, GA3OX2, GA3ox-2 | Detail |
| CX1g005894 | 1:3,519,748-3,520,365 | + | - | C2H1g21612 | LOC_Os01g07840 | - | - | Detail |
| CX1g001472 | 1:3,520,688-3,521,293 | + | C1H9g14927 | C2H1g21612 | LOC_Os01g07840 | Os06g0474600 | - | Detail |
| CX1g001830 | 1:3,534,418-3,534,588 | + | - | - | - | - | - | Detail |
| CX1g004229 | 1:3,538,788-3,548,233 | - | C1H1g04757 | C2H1g12398 | LOC_Os01g08260 | Os01g0177900 | - | Detail |
| CX1g004531 | 1:3,557,106-3,561,419 | - | C1H1g28750 | C2H1g19074 | LOC_Os01g08270 | Os01g0178000 | - | Detail |
| CX1g004172 | 1:3,563,360-3,566,487 | + | C1H1g30727 | C2H1g18970 | LOC_Os01g08280 | Os01g0178100 | - | Detail |
| CX1g001768 | 1:3,567,829-3,569,772 | + | C1H1g15139 | C2H1g21666 | LOC_Os01g08290 | Os01g0178200 | - | Detail |
| CX1g000809 | 1:3,570,241-3,570,408 | - | - | - | - | - | - | Detail |
| CX1g003276 | 1:3,572,616-3,574,978 | - | C1H1g19644 | C2H1g05074 | LOC_Os01g08310 | Os01g0178400 | - | Detail |
| CX1g003361 | 1:3,585,367-3,586,737 | + | - | C2H1g29886 | LOC_Os01g08330 | Os01g0178600 | OsCDR1 | Detail |
| CX1g004954 | 1:3,594,561-3,596,368 | + | C1H1g10164 | C2H1g00169 | LOC_Os01g08340 | Os01g0178700 | - | Detail |