| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g15270 | 3:22,437,636-22,439,218 | + | C1H3g22885 | CX3g030894 | LOC_Os03g43570 | - | - | Detail |
| C2H3g21892 | 3:22,443,813-22,445,355 | + | C1H3g28970 | CX3g030114 | LOC_Os03g43580 | Os03g0636700 | - | Detail |
| C2H3g10602 | 3:22,448,505-22,452,412 | - | C1H3g09456 | CX3g028317 | LOC_Os03g43590 | Os03g0636800 | - | Detail |
| C2H3g26963 | 3:22,495,684-22,499,379 | + | C1H3g17802 | CX3g027391 | LOC_Os03g43670 | Os03g0637800 | OsCR4, MIS2 | Detail |
| C2H3g21555 | 3:22,504,569-22,513,592 | - | C1H3g08726 | CX3g029790 | LOC_Os03g43684 | Os03g0637900 | - | Detail |
| C2H3g25520 | 3:22,531,667-22,536,177 | + | C1H3g11114 | CX3g028463 | LOC_Os03g43720 | Os03g0638200 | - | Detail |
| C2H3g16047 | 3:22,537,773-22,543,641 | - | C1H3g15945 | CX3g029266 | LOC_Os03g43730 | Os03g0638300 | - | Detail |
| C2H3g25175 | 3:22,555,490-22,560,425 | + | C1H3g27096 | CX3g026087 | LOC_Os03g43760 | Os03g0638800 | - | Detail |
| C2H3g20789 | 3:22,596,819-22,613,130 | + | C1H3g11228 | CX3g027536 | LOC_Os03g43800 | - | - | Detail |
| C2H3g02886 | 3:22,623,862-22,626,488 | + | C1H3g23874 | CX3g030991 | LOC_Os03g43810 | Os03g0639300 | OsBP5 | Detail |
| C2H3g22381 | 3:22,710,307-22,714,181 | - | C1H3g03720 | CX3g029268 | LOC_Os03g43840 | Os03g0639600 | - | Detail |
| C2H3g06362 | 3:22,718,756-22,723,436 | + | C1H3g07222 | CX3g025724 | LOC_Os03g43850 | Os03g0639700 | - | Detail |
| C2H3g24990 | 3:22,723,737-22,726,929 | - | C1H3g11773 | CX3g027146 | LOC_Os03g43860 | Os03g0639800 | OsVPS2 | Detail |
| C2H3g01125 | 3:22,747,298-22,752,780 | - | C1H3g13764 | CX3g026102 | LOC_Os03g43890 | Os03g0640100 | OsMSI1 | Detail |
| C2H3g20256 | 3:22,753,154-22,755,125 | - | C1H3g13764 | CX3g026102 | LOC_Os03g43890 | Os03g0640100 | OsMSI1 | Detail |
| C2H3g20329 | 3:22,756,194-22,756,648 | - | C1H3g15764 | - | LOC_Os03g43910 | Os03g0640400 | LO9-177 | Detail |
| C2H3g06880 | 3:22,760,005-22,761,732 | - | C1H3g09832 | CX3g025959 | LOC_Os03g43900 | Os03g0640300 | - | Detail |
| C2H3g28747 | 3:22,765,462-22,768,272 | - | C1H3g02135 | - | LOC_Os03g43910 | Os03g0640400 | LO9-177 | Detail |
| C2H3g10248 | 3:22,776,871-22,782,681 | - | C1H3g29126 | CX3g025023 | LOC_Os03g43930 | Os03g0640800 | - | Detail |
| C2H3g24666 | 3:22,817,245-22,822,201 | - | C1H3g01593 | CX3g029177 | LOC_Os03g43970 | Os03g0641200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003381 | 1:37,207,691-37,208,163 | - | C1H12g09894 | C2H8g28836 | - | - | - | Detail |
| CX1g007121 | 1:37,212,209-37,212,394 | + | - | - | - | Os01g0612350 | - | Detail |
| CX1g002915 | 1:37,224,226-37,226,532 | + | C1H1g26383 | C2H1g17242 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| CX1g006787 | 1:37,229,513-37,237,212 | + | C1H1g28344 | C2H1g15970 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| CX1g000308 | 1:37,241,214-37,246,356 | + | C1H1g14812 | C2H1g26616 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| CX1g004115 | 1:37,249,184-37,249,846 | + | C1H1g24549 | - | LOC_Os01g72360 | Os01g0952900 | - | Detail |
| CX1g006331 | 1:37,252,392-37,254,489 | - | C1H1g10733 | C2H1g27034 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| CX1g002462 | 1:37,259,882-37,262,032 | + | C1H1g18549 | C2H1g16159 | LOC_Os01g72380 | Os01g0953100 | - | Detail |
| CX1g001591 | 1:37,263,352-37,264,545 | - | C1H1g01146 | C2H1g14926 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| CX1g003263 | 1:37,269,785-37,272,080 | - | C1H1g04628 | C2H1g03834 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| CX1g005142 | 1:37,279,971-37,280,603 | + | C1H1g24244 | - | LOC_Os01g72450 | Os01g0953801 | - | Detail |
| CX1g000799 | 1:37,283,862-37,285,079 | + | C1H1g09009 | C2H1g02375 | LOC_Os01g72460 | Os01g0954000 | - | Detail |
| CX1g000592 | 1:37,286,859-37,287,116 | - | C1H1g07941 | - | LOC_Os01g72470 | Os01g0954100 | - | Detail |
| CX1g002521 | 1:37,290,471-37,292,192 | + | C1H1g12859 | C2H1g05250 | LOC_Os01g72480 | Os01g0954400 | OsPIE1 | Detail |
| CX1g002910 | 1:37,304,142-37,307,192 | - | C1H1g06637 | C2H1g18488 | LOC_Os01g72490 | Os01g0954500 | - | Detail |
| CX1g005117 | 1:37,308,934-37,309,176 | + | - | - | - | - | - | Detail |
| CX1g000159 | 1:37,325,362-37,326,510 | - | C1H1g19549 | C2H1g22549 | LOC_Os01g72510 | Os01g0954900 | - | Detail |
| CX1g001249 | 1:37,327,163-37,328,021 | + | C1H1g18988 | C2H1g00932 | LOC_Os01g58160 | - | - | Detail |
| CX1g005638 | 1:37,331,226-37,334,910 | - | C1H1g29256 | C2H1g13785 | LOC_Os01g72520 | Os01g0955000 | - | Detail |
| CX1g003682 | 1:37,339,468-37,339,770 | - | - | - | - | Os01g0955050 | - | Detail |