| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17495 | 9:7,831,579-7,835,572 | - | C2H9g30458 | CX9g057622 | LOC_Os09g15340 | Os09g0322200 | - | Detail |
| C1H9g01884 | 9:7,858,184-7,861,963 | + | C2H9g04080 | CX9g056827 | - | Os09g0322800 | - | Detail |
| C1H9g15325 | 9:7,861,772-7,865,027 | - | C2H9g09843 | - | LOC_Os09g15389 | Os09g0322600 | - | Detail |
| C1H9g18958 | 9:7,872,723-7,873,406 | + | C2H9g19668 | - | LOC_Os09g15400 | Os09g0322900 | - | Detail |
| C1H9g08682 | 9:7,875,721-7,876,955 | + | C2H9g24834 | - | - | - | - | Detail |
| C1H9g20226 | 9:7,878,750-7,883,217 | - | C2H9g07070 | CX9g056147 | LOC_Os09g15420 | Os09g0323000 | - | Detail |
| C1H9g02706 | 9:7,885,742-7,890,600 | - | C2H9g03393 | CX9g057852 | LOC_Os09g15430 | Os09g0323100 | - | Detail |
| C1H9g26925 | 9:7,899,876-7,901,242 | - | C2H12g07326 | CX12g015891 | - | - | - | Detail |
| C1H9g02609 | 9:7,909,719-7,911,776 | - | C2H9g13352 | CX9g057364 | LOC_Os09g15480 | Os09g0323500 | - | Detail |
| C1H9g26563 | 9:7,918,709-7,919,780 | + | C2H9g24164 | CX9g057171 | LOC_Os09g15500 | Os09g0323700 | - | Detail |
| C1H9g31373 | 9:7,963,702-7,964,074 | - | C2H9g09634 | - | - | - | - | Detail |
| C1H9g01463 | 9:7,989,326-7,992,458 | - | C2H9g13951 | CX9g055191 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| C1H9g24231 | 9:8,014,691-8,023,138 | + | C2H9g25380 | CX9g055311 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| C1H9g17537 | 9:8,024,098-8,026,264 | + | C2H9g24003 | - | LOC_Os09g15760 | Os09g0326850 | - | Detail |
| C1H9g09285 | 9:8,028,766-8,032,447 | + | C2H9g24688 | CX9g055228 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| C1H9g31109 | 9:8,035,896-8,036,785 | + | C2H9g08878 | CX9g055621 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| C1H9g27205 | 9:8,038,363-8,040,051 | - | C2H9g09631 | CX9g057160 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| C1H9g14037 | 9:8,042,345-8,044,967 | - | C2H9g12558 | CX9g056557 | LOC_Os09g15800 | Os09g0327200 | - | Detail |
| C1H9g27818 | 9:8,047,045-8,049,810 | + | C2H9g21061 | CX9g057213 | LOC_Os09g15810 | Os09g0327300 | - | Detail |
| C1H9g29316 | 9:8,050,331-8,053,910 | - | C2H9g12353 | CX9g054848 | LOC_Os09g15820 | Os09g0327400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003381 | 1:37,207,691-37,208,163 | - | C1H12g09894 | C2H8g28836 | - | - | - | Detail |
| CX1g007121 | 1:37,212,209-37,212,394 | + | - | - | - | Os01g0612350 | - | Detail |
| CX1g002915 | 1:37,224,226-37,226,532 | + | C1H1g26383 | C2H1g17242 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| CX1g006787 | 1:37,229,513-37,237,212 | + | C1H1g28344 | C2H1g15970 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| CX1g000308 | 1:37,241,214-37,246,356 | + | C1H1g14812 | C2H1g26616 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| CX1g004115 | 1:37,249,184-37,249,846 | + | C1H1g24549 | - | LOC_Os01g72360 | Os01g0952900 | - | Detail |
| CX1g006331 | 1:37,252,392-37,254,489 | - | C1H1g10733 | C2H1g27034 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| CX1g002462 | 1:37,259,882-37,262,032 | + | C1H1g18549 | C2H1g16159 | LOC_Os01g72380 | Os01g0953100 | - | Detail |
| CX1g001591 | 1:37,263,352-37,264,545 | - | C1H1g01146 | C2H1g14926 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| CX1g003263 | 1:37,269,785-37,272,080 | - | C1H1g04628 | C2H1g03834 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| CX1g005142 | 1:37,279,971-37,280,603 | + | C1H1g24244 | - | LOC_Os01g72450 | Os01g0953801 | - | Detail |
| CX1g000799 | 1:37,283,862-37,285,079 | + | C1H1g09009 | C2H1g02375 | LOC_Os01g72460 | Os01g0954000 | - | Detail |
| CX1g000592 | 1:37,286,859-37,287,116 | - | C1H1g07941 | - | LOC_Os01g72470 | Os01g0954100 | - | Detail |
| CX1g002521 | 1:37,290,471-37,292,192 | + | C1H1g12859 | C2H1g05250 | LOC_Os01g72480 | Os01g0954400 | OsPIE1 | Detail |
| CX1g002910 | 1:37,304,142-37,307,192 | - | C1H1g06637 | C2H1g18488 | LOC_Os01g72490 | Os01g0954500 | - | Detail |
| CX1g005117 | 1:37,308,934-37,309,176 | + | - | - | - | - | - | Detail |
| CX1g000159 | 1:37,325,362-37,326,510 | - | C1H1g19549 | C2H1g22549 | LOC_Os01g72510 | Os01g0954900 | - | Detail |
| CX1g001249 | 1:37,327,163-37,328,021 | + | C1H1g18988 | C2H1g00932 | LOC_Os01g58160 | - | - | Detail |
| CX1g005638 | 1:37,331,226-37,334,910 | - | C1H1g29256 | C2H1g13785 | LOC_Os01g72520 | Os01g0955000 | - | Detail |
| CX1g003682 | 1:37,339,468-37,339,770 | - | - | - | - | Os01g0955050 | - | Detail |