| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g16649 | 6:4,921,476-4,923,239 | - | C2H6g13451 | CX6g041856 | LOC_Os06g10990 | Os06g0212900 | - | Detail |
| C1H6g08719 | 6:4,934,018-4,935,004 | - | C2H6g17342 | CX6g044769 | - | - | - | Detail |
| C1H6g08802 | 6:4,941,817-4,945,550 | - | C2H6g15327 | CX6g043284 | LOC_Os06g11020 | Os06g0213200 | - | Detail |
| C1H6g26256 | 6:4,952,637-4,957,436 | - | C2H6g18821 | CX6g045440 | LOC_Os06g11040 | Os06g0213400 | - | Detail |
| C1H6g28407 | 6:4,959,925-4,965,187 | - | C2H6g21056 | CX6g042016 | LOC_Os06g11050 | Os06g0111800 | - | Detail |
| C1H6g27911 | 6:4,971,648-4,974,974 | + | C2H6g04205 | CX6g043031 | LOC_Os06g11070 | Os06g0214100 | - | Detail |
| C1H6g25394 | 6:5,009,783-5,016,895 | - | C2H6g24676 | CX6g045602 | LOC_Os06g11135 | Os06g0214900 | - | Detail |
| C1H6g15327 | 6:5,028,784-5,032,414 | - | C2H6g13237 | CX6g041644 | LOC_Os06g11170 | Os06g0215200 | - | Detail |
| C1H6g11886 | 6:5,033,363-5,040,961 | - | C2H6g12848 | CX6g041530 | LOC_Os06g11180 | Os06g0215300 | - | Detail |
| C1H6g04214 | 6:5,041,314-5,048,849 | - | C2H6g10401 | CX6g041872 | LOC_Os06g11190 | Os06g0215400 | - | Detail |
| C1H6g07641 | 6:5,050,969-5,052,300 | - | C2H6g08264 | - | LOC_Os06g11200 | Os06g0215500 | - | Detail |
| C1H6g30460 | 6:5,053,733-5,055,213 | - | C2H6g08264 | - | LOC_Os06g11210 | Os06g0215600 | - | Detail |
| C1H6g06300 | 6:5,059,616-5,063,488 | - | C2H6g15879 | - | LOC_Os06g11240 | Os06g0215900 | - | Detail |
| C1H6g29115 | 6:5,065,434-5,066,899 | - | C2H6g01602 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g06799 | 6:5,068,541-5,070,535 | - | C2H6g19562 | CX6g042936 | LOC_Os06g11270 | Os06g0216100 | - | Detail |
| C1H6g23925 | 6:5,072,857-5,074,115 | - | C2H6g11179 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g31851 | 6:5,080,585-5,081,840 | - | C2H6g11179 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g15300 | 6:5,084,901-5,090,939 | - | C2H6g01468 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g13881 | 6:5,092,913-5,094,429 | - | C2H6g04782 | - | LOC_Os06g11290 | Os06g0216200 | - | Detail |
| C1H6g13647 | 6:5,103,883-5,104,770 | - | C2H6g21771 | CX6g041766 | LOC_Os06g11310 | Os06g0216700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003381 | 1:37,207,691-37,208,163 | - | C1H12g09894 | C2H8g28836 | - | - | - | Detail |
| CX1g007121 | 1:37,212,209-37,212,394 | + | - | - | - | Os01g0612350 | - | Detail |
| CX1g002915 | 1:37,224,226-37,226,532 | + | C1H1g26383 | C2H1g17242 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| CX1g006787 | 1:37,229,513-37,237,212 | + | C1H1g28344 | C2H1g15970 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| CX1g000308 | 1:37,241,214-37,246,356 | + | C1H1g14812 | C2H1g26616 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| CX1g004115 | 1:37,249,184-37,249,846 | + | C1H1g24549 | - | LOC_Os01g72360 | Os01g0952900 | - | Detail |
| CX1g006331 | 1:37,252,392-37,254,489 | - | C1H1g10733 | C2H1g27034 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| CX1g002462 | 1:37,259,882-37,262,032 | + | C1H1g18549 | C2H1g16159 | LOC_Os01g72380 | Os01g0953100 | - | Detail |
| CX1g001591 | 1:37,263,352-37,264,545 | - | C1H1g01146 | C2H1g14926 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| CX1g003263 | 1:37,269,785-37,272,080 | - | C1H1g04628 | C2H1g03834 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| CX1g005142 | 1:37,279,971-37,280,603 | + | C1H1g24244 | - | LOC_Os01g72450 | Os01g0953801 | - | Detail |
| CX1g000799 | 1:37,283,862-37,285,079 | + | C1H1g09009 | C2H1g02375 | LOC_Os01g72460 | Os01g0954000 | - | Detail |
| CX1g000592 | 1:37,286,859-37,287,116 | - | C1H1g07941 | - | LOC_Os01g72470 | Os01g0954100 | - | Detail |
| CX1g002521 | 1:37,290,471-37,292,192 | + | C1H1g12859 | C2H1g05250 | LOC_Os01g72480 | Os01g0954400 | OsPIE1 | Detail |
| CX1g002910 | 1:37,304,142-37,307,192 | - | C1H1g06637 | C2H1g18488 | LOC_Os01g72490 | Os01g0954500 | - | Detail |
| CX1g005117 | 1:37,308,934-37,309,176 | + | - | - | - | - | - | Detail |
| CX1g000159 | 1:37,325,362-37,326,510 | - | C1H1g19549 | C2H1g22549 | LOC_Os01g72510 | Os01g0954900 | - | Detail |
| CX1g001249 | 1:37,327,163-37,328,021 | + | C1H1g18988 | C2H1g00932 | LOC_Os01g58160 | - | - | Detail |
| CX1g005638 | 1:37,331,226-37,334,910 | - | C1H1g29256 | C2H1g13785 | LOC_Os01g72520 | Os01g0955000 | - | Detail |
| CX1g003682 | 1:37,339,468-37,339,770 | - | - | - | - | Os01g0955050 | - | Detail |