| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g26275 | 4:20,933,593-20,934,760 | - | C1H4g30560 | CX4g034659 | LOC_Os04g40940 | Os04g0486500 | - | Detail |
| C2H4g05355 | 4:20,937,656-20,941,292 | + | C1H4g13926 | CX4g034721 | LOC_Os04g40950 | Os04g0486600 | - | Detail |
| C2H4g01839 | 4:20,946,174-20,947,114 | + | - | - | - | - | - | Detail |
| C2H4g00839 | 4:20,948,304-20,954,744 | + | C1H4g09671 | CX4g033805 | LOC_Os04g40970 | Os04g0486800 | - | Detail |
| C2H4g00941 | 4:20,957,108-20,962,583 | + | C1H4g18547 | CX4g032847 | LOC_Os04g40980 | Os04g0486900 | - | Detail |
| C2H4g30206 | 4:20,963,363-20,965,826 | - | C1H4g29384 | CX4g032966 | LOC_Os04g40990 | Os04g0486950 | - | Detail |
| C2H4g02391 | 4:20,974,964-20,979,256 | + | C1H4g25578 | CX4g032501 | LOC_Os04g41020 | Os04g0487100 | - | Detail |
| C2H4g27624 | 4:20,982,395-20,983,453 | + | C1H4g27067 | CX4g035927 | LOC_Os04g41690 | - | - | Detail |
| C2H4g21017 | 4:20,989,683-20,991,560 | + | C1H4g28199 | CX4g035971 | LOC_Os04g41030 | Os04g0487200 | OsSLA1 | Detail |
| C2H4g25403 | 4:20,993,237-20,993,846 | + | C1H4g06258 | - | - | - | - | Detail |
| C2H4g24694 | 4:20,994,349-20,996,974 | - | C1H4g30001 | CX4g034683 | LOC_Os04g41040 | Os04g0487300 | - | Detail |
| C2H4g28233 | 4:20,998,150-20,998,545 | - | C1H4g08179 | CX4g034669 | LOC_Os04g41050 | Os04g0487400 | - | Detail |
| C2H4g03592 | 4:21,009,732-21,012,589 | - | C1H4g23703 | CX4g031641 | LOC_Os04g41070 | Os04g0487400 | - | Detail |
| C2H4g00904 | 4:21,013,060-21,014,202 | + | C1H4g02416 | CX4g031685 | LOC_Os04g41060 | Os04g0487550 | - | Detail |
| C2H4g04984 | 4:21,025,253-21,031,108 | + | C1H4g02988 | CX4g034743 | LOC_Os04g41100 | Os04g0488000 | - | Detail |
| C2H4g02252 | 4:21,033,545-21,039,686 | + | C1H4g01615 | CX4g034016 | LOC_Os04g41110 | Os04g0488100 | OsRad21-2 | Detail |
| C2H4g00501 | 4:21,043,162-21,044,892 | + | C1H4g04163 | CX4g033501 | LOC_Os04g41120 | Os04g0488200 | - | Detail |
| C2H4g07459 | 4:21,046,847-21,047,517 | - | C1H4g05585 | CX4g036330 | LOC_Os04g41130 | Os04g0488400 | - | Detail |
| C2H4g11043 | 4:21,050,663-21,056,350 | - | C1H4g05728 | CX4g033446 | LOC_Os04g41140 | Os04g0488500 | - | Detail |
| C2H4g00004 | 4:21,056,620-21,058,653 | + | C1H4g04302 | CX4g035978 | LOC_Os04g41150 | Os04g0488600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003925 | 1:36,885,346-36,888,687 | - | C1H1g09696 | C2H1g23990 | LOC_Os01g71770 | Os01g0945800 | - | Detail |
| CX1g005735 | 1:36,892,322-36,893,617 | + | C1H1g13289 | - | LOC_Os01g71780 | Os01g0946100 | - | Detail |
| CX1g004537 | 1:36,896,304-36,896,915 | + | C1H1g14230 | C2H1g17128 | LOC_Os01g71790 | Os01g0946200 | - | Detail |
| CX1g003320 | 1:36,899,183-36,900,109 | - | C1H1g16335 | C2H1g24810 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g005530 | 1:36,901,777-36,907,226 | + | C1H1g01086 | C2H1g24810 | LOC_Os01g71830 | Os01g0946700 | OsGLN1 | Detail |
| CX1g006063 | 1:36,908,492-36,909,872 | - | C1H1g19149 | C2H1g02291 | LOC_Os01g71800 | Os01g0946300 | - | Detail |
| CX1g000210 | 1:36,911,499-36,913,061 | - | C1H1g28208 | C2H1g26163 | - | Os01g0946850 | - | Detail |
| CX1g000254 | 1:36,930,844-36,932,970 | + | C1H1g01086 | C2H1g25094 | LOC_Os01g71830 | Os01g0946500 | - | Detail |
| CX1g006738 | 1:36,943,059-36,943,985 | + | C1H1g16335 | C2H1g25094 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g006181 | 1:36,947,870-36,949,162 | + | C1H1g14011 | C2H1g29780 | LOC_Os01g60590 | Os01g0373400 | - | Detail |
| CX1g002683 | 1:36,950,049-36,950,868 | + | C1H1g30039 | C2H1g17996 | LOC_Os01g65240 | Os01g0872900 | - | Detail |
| CX1g006940 | 1:36,953,685-36,956,627 | - | C1H1g16091 | C2H1g07223 | LOC_Os01g71930 | Os01g0947700 | Osg1 | Detail |
| CX1g005350 | 1:36,992,967-37,000,137 | + | C1H1g28153 | C2H1g25982 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| CX1g002069 | 1:37,013,794-37,015,131 | + | C1H1g11535 | C2H1g13478 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| CX1g003090 | 1:37,017,071-37,019,246 | + | C1H1g04988 | C2H1g24573 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| CX1g004443 | 1:37,019,784-37,022,584 | - | C1H1g12107 | C2H1g07613 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| CX1g001292 | 1:37,024,110-37,027,364 | - | C1H1g04245 | C2H1g30437 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| CX1g006880 | 1:37,033,695-37,035,175 | - | - | - | - | - | - | Detail |
| CX1g002112 | 1:37,038,551-37,038,715 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g006785 | 1:37,042,934-37,045,791 | - | C1H1g24544 | C2H1g07385 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |