| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g24736 | 1:10,789,731-10,790,117 | - | C1H1g04368 | CX1g006862 | LOC_Os01g21880 | Os01g0321900 | - | Detail |
| C2H1g20993 | 1:10,804,560-10,811,430 | - | C1H1g01028 | CX1g006339 | LOC_Os01g21940 | Os01g0322800 | - | Detail |
| C2H1g28662 | 1:10,826,558-10,831,854 | + | C1H1g16371 | CX1g004710 | LOC_Os01g21960 | Os01g0323000 | - | Detail |
| C2H1g16516 | 1:10,832,890-10,836,042 | - | C1H1g02221 | CX1g003996 | LOC_Os01g21970 | Os01g0323100 | - | Detail |
| C2H1g08513 | 1:10,855,132-10,860,532 | + | C1H1g08517 | CX1g004803 | LOC_Os01g21990 | Os01g0323300 | OsCAF2 | Detail |
| C2H1g01046 | 1:10,872,202-10,874,306 | - | C1H1g18455 | CX1g001604 | LOC_Os01g22010 | Os01g0323600 | OsSAMS2 | Detail |
| C2H1g09786 | 1:10,888,788-10,890,713 | + | C1H1g29029 | CX1g000921 | LOC_Os01g22090 | - | - | Detail |
| C2H1g10357 | 1:10,926,917-10,933,104 | + | C1H1g15871 | CX1g006222 | LOC_Os01g22230 | Os01g0326000 | - | Detail |
| C2H1g20136 | 1:10,938,754-10,943,194 | + | C1H1g24816 | CX1g005114 | LOC_Os01g22249 | Os01g0326300 | - | Detail |
| C2H1g15280 | 1:10,948,133-10,952,333 | + | C1H1g03049 | CX1g004213 | LOC_Os01g22336 | Os01g0327000 | - | Detail |
| C2H1g15493 | 1:10,959,492-10,965,102 | + | C1H1g21696 | CX1g006222 | LOC_Os01g22352 | Os01g0327100 | - | Detail |
| C2H1g29282 | 1:10,973,532-10,977,616 | + | C1H1g31522 | CX1g005114 | LOC_Os01g22370 | Os01g0327400 | - | Detail |
| C2H1g23537 | 1:10,983,453-10,993,360 | - | C1H1g27960 | CX1g002464 | LOC_Os01g22390 | Os01g0327600 | - | Detail |
| C2H1g06724 | 1:10,994,005-10,996,145 | - | C1H1g10725 | CX1g004469 | LOC_Os01g22430 | Os01g0327900 | - | Detail |
| C2H1g29147 | 1:11,003,380-11,005,167 | - | C1H1g31786 | CX1g004469 | LOC_Os01g22430 | Os01g0327900 | - | Detail |
| C2H1g28342 | 1:11,006,037-11,006,312 | - | - | - | - | - | - | Detail |
| C2H1g18847 | 1:11,020,765-11,024,713 | - | C1H1g01439 | CX1g002831 | LOC_Os01g22480 | Os01g0328300 | - | Detail |
| C2H1g28322 | 1:11,030,136-11,032,958 | + | C1H1g31467 | CX1g005736 | LOC_Os01g22500 | Os01g0328500 | - | Detail |
| C2H1g27694 | 1:11,033,562-11,038,770 | + | C1H1g21789 | CX1g002258 | LOC_Os01g22510 | Os01g0328600 | - | Detail |
| C2H1g16889 | 1:11,039,700-11,042,985 | - | C1H1g28603 | CX1g003140 | LOC_Os01g22520 | Os01g0328700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003925 | 1:36,885,346-36,888,687 | - | C1H1g09696 | C2H1g23990 | LOC_Os01g71770 | Os01g0945800 | - | Detail |
| CX1g005735 | 1:36,892,322-36,893,617 | + | C1H1g13289 | - | LOC_Os01g71780 | Os01g0946100 | - | Detail |
| CX1g004537 | 1:36,896,304-36,896,915 | + | C1H1g14230 | C2H1g17128 | LOC_Os01g71790 | Os01g0946200 | - | Detail |
| CX1g003320 | 1:36,899,183-36,900,109 | - | C1H1g16335 | C2H1g24810 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g005530 | 1:36,901,777-36,907,226 | + | C1H1g01086 | C2H1g24810 | LOC_Os01g71830 | Os01g0946700 | OsGLN1 | Detail |
| CX1g006063 | 1:36,908,492-36,909,872 | - | C1H1g19149 | C2H1g02291 | LOC_Os01g71800 | Os01g0946300 | - | Detail |
| CX1g000210 | 1:36,911,499-36,913,061 | - | C1H1g28208 | C2H1g26163 | - | Os01g0946850 | - | Detail |
| CX1g000254 | 1:36,930,844-36,932,970 | + | C1H1g01086 | C2H1g25094 | LOC_Os01g71830 | Os01g0946500 | - | Detail |
| CX1g006738 | 1:36,943,059-36,943,985 | + | C1H1g16335 | C2H1g25094 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g006181 | 1:36,947,870-36,949,162 | + | C1H1g14011 | C2H1g29780 | LOC_Os01g60590 | Os01g0373400 | - | Detail |
| CX1g002683 | 1:36,950,049-36,950,868 | + | C1H1g30039 | C2H1g17996 | LOC_Os01g65240 | Os01g0872900 | - | Detail |
| CX1g006940 | 1:36,953,685-36,956,627 | - | C1H1g16091 | C2H1g07223 | LOC_Os01g71930 | Os01g0947700 | Osg1 | Detail |
| CX1g005350 | 1:36,992,967-37,000,137 | + | C1H1g28153 | C2H1g25982 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| CX1g002069 | 1:37,013,794-37,015,131 | + | C1H1g11535 | C2H1g13478 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| CX1g003090 | 1:37,017,071-37,019,246 | + | C1H1g04988 | C2H1g24573 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| CX1g004443 | 1:37,019,784-37,022,584 | - | C1H1g12107 | C2H1g07613 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| CX1g001292 | 1:37,024,110-37,027,364 | - | C1H1g04245 | C2H1g30437 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| CX1g006880 | 1:37,033,695-37,035,175 | - | - | - | - | - | - | Detail |
| CX1g002112 | 1:37,038,551-37,038,715 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g006785 | 1:37,042,934-37,045,791 | - | C1H1g24544 | C2H1g07385 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |