| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g05846 | 6:3,000,410-3,000,739 | + | C2H6g11064 | - | - | - | - | Detail |
| C1H6g06294 | 6:3,007,148-3,007,664 | - | - | - | - | - | - | Detail |
| C1H6g19224 | 6:3,031,990-3,041,320 | - | C2H6g12040 | CX6g045600 | LOC_Os06g07474 | Os06g0171600 | - | Detail |
| C1H6g18552 | 6:3,040,853-3,043,368 | + | C2H6g23378 | CX6g042658 | LOC_Os06g07480 | Os06g0171700 | - | Detail |
| C1H6g25044 | 6:3,043,750-3,050,495 | - | C2H6g24054 | CX6g044064 | LOC_Os06g07490 | Os06g0171800 | - | Detail |
| C1H6g16236 | 6:3,053,330-3,060,051 | + | C2H6g04632 | CX6g042998 | LOC_Os06g07540 | Os06g0171900 | - | Detail |
| C1H6g10657 | 6:3,060,755-3,063,649 | + | C2H6g18436 | CX6g044733 | LOC_Os06g07550 | Os06g0172000 | - | Detail |
| C1H6g08505 | 6:3,069,977-3,070,684 | + | C2H6g03204 | CX6g045382 | LOC_Os06g07560 | Os06g0172200 | - | Detail |
| C1H6g22975 | 6:3,073,368-3,073,631 | + | C2H6g06251 | CX6g041584 | LOC_Os06g07580 | Os06g0172600 | - | Detail |
| C1H6g17050 | 6:3,083,559-3,089,711 | + | - | - | - | - | - | Detail |
| C1H6g28387 | 6:3,092,457-3,095,899 | - | C2H6g11115 | CX6g045868 | LOC_Os06g07600 | Os06g0172800 | - | Detail |
| C1H6g29081 | 6:3,099,478-3,105,329 | + | C2H6g28357 | CX6g045385 | LOC_Os06g07620 | Os06g0173000 | - | Detail |
| C1H6g24053 | 6:3,106,828-3,111,490 | + | C2H6g02209 | CX6g043458 | LOC_Os06g07630 | Os06g0173100 | OsRpt5b | Detail |
| C1H6g10438 | 6:3,132,459-3,134,348 | - | C2H6g14609 | CX6g044658 | LOC_Os06g07700 | Os06g0173800 | - | Detail |
| C1H6g24712 | 6:3,155,391-3,157,481 | + | C2H6g29331 | CX6g041809 | LOC_Os06g07760 | Os06g0174300 | - | Detail |
| C1H6g20008 | 6:3,158,453-3,160,504 | + | C2H6g13115 | CX6g043121 | LOC_Os06g07770 | Os06g0174350 | - | Detail |
| C1H6g25449 | 6:3,162,619-3,168,517 | + | C2H6g24511 | CX6g043121 | LOC_Os06g07770 | Os06g0174375 | - | Detail |
| C1H6g24998 | 6:3,168,407-3,171,719 | - | C2H6g26780 | CX6g044484 | LOC_Os06g07780 | Os06g0174400 | - | Detail |
| C1H6g14454 | 6:3,217,512-3,219,088 | + | - | - | - | - | - | Detail |
| C1H6g24373 | 6:3,220,071-3,220,574 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003925 | 1:36,885,346-36,888,687 | - | C1H1g09696 | C2H1g23990 | LOC_Os01g71770 | Os01g0945800 | - | Detail |
| CX1g005735 | 1:36,892,322-36,893,617 | + | C1H1g13289 | - | LOC_Os01g71780 | Os01g0946100 | - | Detail |
| CX1g004537 | 1:36,896,304-36,896,915 | + | C1H1g14230 | C2H1g17128 | LOC_Os01g71790 | Os01g0946200 | - | Detail |
| CX1g003320 | 1:36,899,183-36,900,109 | - | C1H1g16335 | C2H1g24810 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g005530 | 1:36,901,777-36,907,226 | + | C1H1g01086 | C2H1g24810 | LOC_Os01g71830 | Os01g0946700 | OsGLN1 | Detail |
| CX1g006063 | 1:36,908,492-36,909,872 | - | C1H1g19149 | C2H1g02291 | LOC_Os01g71800 | Os01g0946300 | - | Detail |
| CX1g000210 | 1:36,911,499-36,913,061 | - | C1H1g28208 | C2H1g26163 | - | Os01g0946850 | - | Detail |
| CX1g000254 | 1:36,930,844-36,932,970 | + | C1H1g01086 | C2H1g25094 | LOC_Os01g71830 | Os01g0946500 | - | Detail |
| CX1g006738 | 1:36,943,059-36,943,985 | + | C1H1g16335 | C2H1g25094 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g006181 | 1:36,947,870-36,949,162 | + | C1H1g14011 | C2H1g29780 | LOC_Os01g60590 | Os01g0373400 | - | Detail |
| CX1g002683 | 1:36,950,049-36,950,868 | + | C1H1g30039 | C2H1g17996 | LOC_Os01g65240 | Os01g0872900 | - | Detail |
| CX1g006940 | 1:36,953,685-36,956,627 | - | C1H1g16091 | C2H1g07223 | LOC_Os01g71930 | Os01g0947700 | Osg1 | Detail |
| CX1g005350 | 1:36,992,967-37,000,137 | + | C1H1g28153 | C2H1g25982 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| CX1g002069 | 1:37,013,794-37,015,131 | + | C1H1g11535 | C2H1g13478 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| CX1g003090 | 1:37,017,071-37,019,246 | + | C1H1g04988 | C2H1g24573 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| CX1g004443 | 1:37,019,784-37,022,584 | - | C1H1g12107 | C2H1g07613 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| CX1g001292 | 1:37,024,110-37,027,364 | - | C1H1g04245 | C2H1g30437 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| CX1g006880 | 1:37,033,695-37,035,175 | - | - | - | - | - | - | Detail |
| CX1g002112 | 1:37,038,551-37,038,715 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g006785 | 1:37,042,934-37,045,791 | - | C1H1g24544 | C2H1g07385 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |