| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02565 | 5:24,043,936-24,046,192 | - | C2H5g01309 | CX5g040689 | LOC_Os05g51060 | Os05g0588200 | OsPTD1 | Detail |
| C1H5g03972 | 5:24,048,990-24,053,630 | + | C2H5g01521 | CX5g037056 | LOC_Os05g51070 | Os05g0588300 | - | Detail |
| C1H5g19495 | 5:24,056,002-24,057,337 | - | C2H5g15276 | CX5g038358 | LOC_Os05g51090 | Os05g0588500 | SWEET5, OsSWEET5 | Detail |
| C1H5g16076 | 5:24,059,924-24,060,441 | - | C2H5g28115 | - | - | - | - | Detail |
| C1H5g07091 | 5:24,065,052-24,071,513 | - | C2H5g12592 | CX5g037152 | LOC_Os05g51110 | Os05g0588700 | - | Detail |
| C1H5g04606 | 5:24,072,271-24,080,627 | + | C2H5g14806 | - | - | Os01g0605000 | - | Detail |
| C1H5g21708 | 5:24,074,222-24,076,122 | - | C2H5g18087 | CX5g037008 | LOC_Os05g51130 | Os05g0588850 | - | Detail |
| C1H5g29117 | 5:24,077,661-24,079,232 | - | C2H5g11157 | CX5g037581 | LOC_Os05g51130 | Os05g0588900 | - | Detail |
| C1H5g25345 | 5:24,082,338-24,085,761 | + | C2H5g00751 | CX5g037769 | LOC_Os05g51140 | Os05g0589000 | - | Detail |
| C1H5g16036 | 5:24,086,718-24,089,405 | + | C2H5g06581 | CX5g039079 | LOC_Os05g51150 | Os05g0589200 | - | Detail |
| C1H5g14286 | 5:24,091,507-24,092,488 | - | C2H5g10509 | CX5g039463 | LOC_Os05g51160 | Os05g0589400 | - | Detail |
| C1H5g11554 | 5:24,094,058-24,097,313 | + | C2H5g25842 | CX5g037667 | LOC_Os05g51180 | Os05g0589600 | - | Detail |
| C1H5g06374 | 5:24,098,512-24,108,328 | - | C2H5g18573 | CX5g037718 | LOC_Os05g51190 | Os05g0589700 | - | Detail |
| C1H5g25711 | 5:24,123,804-24,125,255 | - | C2H5g15682 | CX5g040079 | LOC_Os05g51220 | Os05g0590000 | - | Detail |
| C1H5g15774 | 5:24,126,238-24,128,074 | + | C2H5g27742 | CX5g040435 | LOC_Os05g51230 | Os05g0590100 | - | Detail |
| C1H5g25595 | 5:24,130,507-24,130,941 | - | C2H5g27114 | CX5g040181 | LOC_Os05g51240 | Os05g0590300 | D14L2a | Detail |
| C1H5g28593 | 5:24,131,870-24,132,322 | - | C2H5g27114 | CX5g040181 | LOC_Os05g51240 | Os05g0590300 | D14L2a | Detail |
| C1H5g16193 | 5:24,139,498-24,140,788 | + | C2H5g10959 | CX5g039719 | LOC_Os05g51360 | Os05g0591400 | OsEBS | Detail |
| C1H5g00184 | 5:24,146,710-24,150,805 | + | C2H5g16340 | CX5g037625 | LOC_Os05g51390 | Os05g0591600 | LOGL8 | Detail |
| C1H5g07610 | 5:24,155,826-24,160,765 | + | C2H5g03812 | CX5g037154 | LOC_Os05g51400 | Os05g0591800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003925 | 1:36,885,346-36,888,687 | - | C1H1g09696 | C2H1g23990 | LOC_Os01g71770 | Os01g0945800 | - | Detail |
| CX1g005735 | 1:36,892,322-36,893,617 | + | C1H1g13289 | - | LOC_Os01g71780 | Os01g0946100 | - | Detail |
| CX1g004537 | 1:36,896,304-36,896,915 | + | C1H1g14230 | C2H1g17128 | LOC_Os01g71790 | Os01g0946200 | - | Detail |
| CX1g003320 | 1:36,899,183-36,900,109 | - | C1H1g16335 | C2H1g24810 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g005530 | 1:36,901,777-36,907,226 | + | C1H1g01086 | C2H1g24810 | LOC_Os01g71830 | Os01g0946700 | OsGLN1 | Detail |
| CX1g006063 | 1:36,908,492-36,909,872 | - | C1H1g19149 | C2H1g02291 | LOC_Os01g71800 | Os01g0946300 | - | Detail |
| CX1g000210 | 1:36,911,499-36,913,061 | - | C1H1g28208 | C2H1g26163 | - | Os01g0946850 | - | Detail |
| CX1g000254 | 1:36,930,844-36,932,970 | + | C1H1g01086 | C2H1g25094 | LOC_Os01g71830 | Os01g0946500 | - | Detail |
| CX1g006738 | 1:36,943,059-36,943,985 | + | C1H1g16335 | C2H1g25094 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| CX1g006181 | 1:36,947,870-36,949,162 | + | C1H1g14011 | C2H1g29780 | LOC_Os01g60590 | Os01g0373400 | - | Detail |
| CX1g002683 | 1:36,950,049-36,950,868 | + | C1H1g30039 | C2H1g17996 | LOC_Os01g65240 | Os01g0872900 | - | Detail |
| CX1g006940 | 1:36,953,685-36,956,627 | - | C1H1g16091 | C2H1g07223 | LOC_Os01g71930 | Os01g0947700 | Osg1 | Detail |
| CX1g005350 | 1:36,992,967-37,000,137 | + | C1H1g28153 | C2H1g25982 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| CX1g002069 | 1:37,013,794-37,015,131 | + | C1H1g11535 | C2H1g13478 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| CX1g003090 | 1:37,017,071-37,019,246 | + | C1H1g04988 | C2H1g24573 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| CX1g004443 | 1:37,019,784-37,022,584 | - | C1H1g12107 | C2H1g07613 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| CX1g001292 | 1:37,024,110-37,027,364 | - | C1H1g04245 | C2H1g30437 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| CX1g006880 | 1:37,033,695-37,035,175 | - | - | - | - | - | - | Detail |
| CX1g002112 | 1:37,038,551-37,038,715 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g006785 | 1:37,042,934-37,045,791 | - | C1H1g24544 | C2H1g07385 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |