| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11001 | 4:14,164,081-14,168,879 | - | C1H4g08997 | CX4g034310 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| C2H4g17175 | 4:14,180,175-14,182,661 | + | C1H4g05397 | CX4g034236 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| C2H4g23045 | 4:14,195,253-14,202,545 | + | C1H4g22441 | CX4g035357 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| C2H4g11650 | 4:14,222,224-14,225,155 | - | C1H4g22936 | CX4g032228 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| C2H4g04479 | 4:14,248,339-14,250,711 | + | C1H4g25714 | CX4g035158 | LOC_Os04g28300 | Os04g0351333 | - | Detail |
| C2H4g21363 | 4:14,289,764-14,291,863 | - | - | CX4g032447 | - | Os04g0351933 | - | Detail |
| C2H4g20483 | 4:14,308,307-14,311,786 | - | C1H4g17106 | CX4g035796 | LOC_Os04g28420 | Os04g0352400 | OsFKBP65, OsFKBP62b | Detail |
| C2H4g20527 | 4:14,314,841-14,317,346 | - | C1H4g12183 | CX4g034006 | - | Os04g0514500 | - | Detail |
| C2H4g10375 | 4:14,317,655-14,317,945 | - | C1H12g08774 | CX4g034006 | LOC_Os12g33165 | Os12g0516350 | - | Detail |
| C2H4g19395 | 4:14,318,657-14,335,073 | - | C1H4g30599 | CX4g032773 | LOC_Os04g28460 | Os04g0353000 | - | Detail |
| C2H4g27416 | 4:14,346,233-14,353,053 | + | C1H4g12388 | CX4g035108 | LOC_Os04g28520 | Os04g0353600 | OsFAR5 | Detail |
| C2H4g00657 | 4:14,371,911-14,373,770 | + | C1H4g08909 | CX4g035108 | LOC_Os04g28620 | Os04g0353600 | OsFAR5 | Detail |
| C2H4g13961 | 4:14,391,075-14,395,383 | + | C1H4g20993 | CX4g035108 | LOC_Os04g28680 | Os04g0355500 | - | Detail |
| C2H4g02790 | 4:14,404,858-14,405,935 | + | C1H4g20993 | CX4g035108 | LOC_Os04g28520 | Os04g0353600 | OsFAR5 | Detail |
| C2H4g06544 | 4:14,456,359-14,463,117 | - | C1H4g04495 | CX4g031953 | LOC_Os04g28820 | Os04g0357300 | - | Detail |
| C2H4g26367 | 4:14,470,976-14,471,554 | + | - | - | - | - | - | Detail |
| C2H4g22686 | 4:14,483,131-14,484,729 | + | C1H4g03600 | CX4g035284 | LOC_Os04g28860 | - | - | Detail |
| C2H4g15541 | 4:14,485,331-14,485,621 | + | C1H4g03600 | CX4g035284 | LOC_Os04g28860 | - | - | Detail |
| C2H4g24652 | 4:14,487,401-14,490,996 | + | C1H4g03600 | - | LOC_Os04g28860 | - | - | Detail |
| C2H4g09999 | 4:14,491,622-14,493,859 | + | C1H4g03600 | CX4g031772 | LOC_Os04g28870 | Os04g0358000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006518 | 1:36,536,885-36,539,025 | - | C1H1g21557 | C2H1g06725 | LOC_Os01g70970 | Os01g0935800 | - | Detail |
| CX1g006200 | 1:36,541,632-36,541,859 | - | - | - | - | - | - | Detail |
| CX1g006977 | 1:36,544,075-36,545,984 | - | C1H1g23176 | C2H1g20555 | LOC_Os01g70980 | Os01g0935900 | - | Detail |
| CX1g006835 | 1:36,548,167-36,548,481 | + | C1H1g15115 | - | LOC_Os01g70990 | Os01g0936000 | - | Detail |
| CX1g005643 | 1:36,553,819-36,557,179 | + | C1H1g20598 | C2H1g05708 | LOC_Os01g71000 | Os01g0936100 | - | Detail |
| CX1g003103 | 1:36,558,249-36,561,408 | - | C1H1g13211 | C2H1g29418 | LOC_Os01g71010 | Os01g0936200 | - | Detail |
| CX1g006168 | 1:36,568,109-36,570,678 | - | C1H1g15249 | C2H1g14471 | LOC_Os01g71040 | Os01g0936700 | - | Detail |
| CX1g005192 | 1:36,573,580-36,577,893 | - | C1H1g27605 | C2H1g12293 | LOC_Os01g71050 | Os01g0936800 | - | Detail |
| CX1g005296 | 1:36,608,861-36,614,498 | - | C1H1g14403 | C2H1g15329 | LOC_Os01g71114 | Os01g0937300 | - | Detail |
| CX1g004383 | 1:36,619,620-36,627,283 | - | C1H1g12751 | C2H1g06509 | LOC_Os01g71094 | Os01g0937200 | - | Detail |
| CX1g000753 | 1:36,634,528-36,636,319 | + | C1H1g17052 | C2H1g30429 | LOC_Os01g71130 | Os01g0937500 | - | Detail |
| CX1g003344 | 1:36,638,755-36,640,083 | + | C1H1g08199 | C2H1g30429 | LOC_Os01g71140 | Os01g0937600 | - | Detail |
| CX1g001482 | 1:36,640,531-36,643,137 | + | C1H1g20166 | C2H1g30429 | LOC_Os01g71160 | Os01g0937800 | - | Detail |
| CX1g003237 | 1:36,644,635-36,644,907 | - | C1H1g08219 | C2H1g01068 | LOC_Os01g74440 | Os01g0975800 | MADS79 | Detail |
| CX1g005072 | 1:36,646,671-36,647,132 | + | C1H1g10073 | - | LOC_Os01g71170 | Os01g0937900 | - | Detail |
| CX1g006762 | 1:36,650,686-36,655,706 | + | C1H1g30231 | C2H1g19731 | LOC_Os01g71180 | Os01g0938100 | - | Detail |
| CX1g000756 | 1:36,661,188-36,666,292 | + | C1H1g07210 | C2H1g00426 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| CX1g000266 | 1:36,669,027-36,669,521 | - | C1H1g13834 | - | LOC_Os01g71210 | Os01g0938400 | - | Detail |
| CX1g005814 | 1:36,670,724-36,670,873 | - | - | - | - | - | - | Detail |
| CX1g004308 | 1:36,672,747-36,677,213 | - | C1H1g26126 | C2H1g14108 | LOC_Os01g71220 | Os01g0938600 | - | Detail |