| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07028 | 1:7,996,927-7,997,947 | + | C1H1g09557 | CX1g004307 | LOC_Os01g15800 | - | - | Detail |
| C2H1g02259 | 1:7,998,958-8,000,750 | - | C1H1g21240 | CX1g003830 | LOC_Os01g15810 | Os01g0263000 | - | Detail |
| C2H1g12087 | 1:8,016,183-8,018,406 | + | C1H1g27085 | CX1g006222 | LOC_Os01g15830 | Os01g0263300 | - | Detail |
| C2H1g23581 | 1:8,018,491-8,023,280 | - | C1H1g08776 | CX1g000999 | LOC_Os01g15840 | Os01g0263400 | - | Detail |
| C2H1g15648 | 1:8,023,490-8,028,004 | + | C1H1g08020 | CX1g002687 | LOC_Os01g15850 | Os01g0263500 | - | Detail |
| C2H1g07347 | 1:8,029,359-8,032,436 | + | C1H10g06964 | CX1g002839 | LOC_Os01g15860 | Os01g0263600 | - | Detail |
| C2H1g18028 | 1:8,049,743-8,052,651 | - | C1H1g18015 | CX1g006868 | LOC_Os01g15900 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |
| C2H1g12778 | 1:8,058,826-8,060,840 | + | C1H1g15031 | - | LOC_Os01g15910 | Os01g0264100 | - | Detail |
| C2H1g29466 | 1:8,062,729-8,068,984 | + | C1H1g15031 | - | LOC_Os01g15910 | Os01g0264100 | - | Detail |
| C2H1g18875 | 1:8,082,807-8,083,361 | + | C1H1g15752 | CX1g003610 | LOC_Os01g15970 | Os01g0264400 | - | Detail |
| C2H1g29970 | 1:8,085,220-8,087,374 | + | C1H1g22583 | CX1g005560 | LOC_Os01g15979 | Os01g0264500 | - | Detail |
| C2H1g16351 | 1:8,090,363-8,091,922 | + | C1H1g22583 | CX1g004846 | LOC_Os01g15990 | Os01g0264600 | - | Detail |
| C2H1g04930 | 1:8,097,538-8,101,697 | - | C1H1g00764 | CX1g003410 | LOC_Os01g16000 | Os01g0264700 | OsSec14-1 | Detail |
| C2H1g18047 | 1:8,107,813-8,111,834 | + | C1H1g30463 | CX1g006955 | LOC_Os01g16010 | Os01g0264900 | - | Detail |
| C2H1g05764 | 1:8,112,646-8,114,013 | + | - | CX1g002598 | LOC_Os01g16020 | Os01g0265000 | OsGGR2, LYL2, OsGGRII | Detail |
| C2H1g10976 | 1:8,114,701-8,117,125 | - | C1H1g31421 | CX1g006039 | LOC_Os01g16030 | Os01g0265100 | - | Detail |
| C2H1g02114 | 1:8,120,036-8,123,154 | - | C1H1g11286 | CX1g005747 | LOC_Os01g16040 | Os01g0265200 | OsPAPST1 | Detail |
| C2H1g11487 | 1:8,132,263-8,132,761 | - | - | CX1g007112 | - | - | - | Detail |
| C2H1g21228 | 1:8,133,052-8,135,438 | - | - | CX1g002223 | - | Os01g0265400 | - | Detail |
| C2H1g20365 | 1:8,137,800-8,140,286 | - | C1H1g29094 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003420 | 1:36,178,818-36,179,941 | - | C1H1g09506 | C2H1g18456 | LOC_Os01g70560 | Os01g0931200 | - | Detail |
| CX1g006757 | 1:36,180,825-36,183,856 | - | C1H1g24833 | C2H1g06067 | LOC_Os01g70570 | Os01g0931300 | - | Detail |
| CX1g003208 | 1:36,184,498-36,187,197 | - | C1H1g13658 | C2H1g10796 | LOC_Os01g70580 | Os01g0931400 | ROX1 | Detail |
| CX1g003981 | 1:36,190,740-36,191,705 | - | C1H1g18581 | C2H1g27953 | LOC_Os01g70590 | Os01g0931600 | - | Detail |
| CX1g001113 | 1:36,195,155-36,196,204 | + | C1H1g26788 | C2H1g07776 | LOC_Os01g70610 | Os01g0931700 | - | Detail |
| CX1g001828 | 1:36,211,053-36,216,561 | + | C1H7g05130 | C2H1g30518 | - | - | - | Detail |
| CX1g005653 | 1:36,243,555-36,243,973 | + | - | - | - | - | - | Detail |
| CX1g003131 | 1:36,262,535-36,266,997 | - | C1H1g10656 | C2H1g22890 | LOC_Os02g05440 | Os02g0147100 | - | Detail |
| CX1g006266 | 1:36,269,776-36,270,736 | - | C1H1g28058 | C2H1g13687 | LOC_Os01g66590 | Os01g0889400 | - | Detail |
| CX1g004151 | 1:36,294,444-36,298,950 | - | C1H1g25651 | C2H1g20242 | LOC_Os01g70660 | Os01g0932500 | - | Detail |
| CX1g002892 | 1:36,303,420-36,303,575 | - | - | - | - | Os01g0932550 | - | Detail |
| CX1g001711 | 1:36,306,870-36,311,916 | + | C1H1g14735 | C2H1g18675 | LOC_Os01g70670 | Os01g0932600 | - | Detail |
| CX1g007005 | 1:36,313,913-36,314,378 | + | C1H1g17114 | C2H1g01462 | LOC_Os01g70680 | Os01g0932700 | - | Detail |
| CX1g003390 | 1:36,315,778-36,316,104 | - | C1H1g04222 | C2H1g00631 | LOC_Os01g70690 | Os01g0932950 | - | Detail |
| CX1g002018 | 1:36,320,654-36,322,258 | - | C1H1g20139 | C2H1g18207 | LOC_Os01g70710 | Os01g0933200 | OsHIPP56 | Detail |
| CX1g005929 | 1:36,330,008-36,330,388 | - | C1H1g01623 | - | LOC_Os01g70730 | Os01g0933500 | - | Detail |
| CX1g001827 | 1:36,337,598-36,338,802 | - | C1H1g21630 | C2H1g30525 | LOC_Os01g70770 | Os01g0933900 | - | Detail |
| CX1g001936 | 1:36,340,995-36,345,233 | - | C1H1g13919 | C2H1g22680 | LOC_Os01g70780 | Os01g0934000 | - | Detail |
| CX1g006839 | 1:36,347,634-36,348,641 | - | C1H1g10289 | C2H1g12576 | LOC_Os01g70790 | Os01g0934100 | - | Detail |
| CX1g002556 | 1:36,386,001-36,386,617 | - | C1H1g28858 | - | - | - | - | Detail |