| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25319 | 5:19,156,751-19,158,788 | + | C1H5g20773 | CX5g038806 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| C2H5g01133 | 5:19,161,477-19,166,795 | + | C1H5g12108 | CX5g039882 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| C2H5g16713 | 5:19,168,094-19,171,222 | - | C1H5g15206 | CX5g040078 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |
| C2H5g05069 | 5:19,173,660-19,179,975 | - | C1H5g26692 | CX5g038352 | LOC_Os05g38830 | Os05g0463900 | - | Detail |
| C2H5g10683 | 5:19,184,512-19,192,346 | + | C1H5g04043 | CX5g038856 | LOC_Os05g38850 | Os05g0464100 | - | Detail |
| C2H5g06217 | 5:19,194,622-19,194,965 | - | C1H5g03107 | - | - | - | - | Detail |
| C2H5g23544 | 5:19,195,352-19,195,600 | - | C1H5g03378 | - | LOC_Os05g38860 | Os05g0464200 | - | Detail |
| C2H5g00642 | 5:19,199,886-19,206,233 | - | C1H5g03501 | CX5g040041 | LOC_Os05g38930 | Os05g0464300 | - | Detail |
| C2H5g07866 | 5:19,217,478-19,217,720 | + | C1H5g26266 | CX5g037441 | LOC_Os05g38940 | Os05g0465000 | - | Detail |
| C2H5g20572 | 5:19,223,965-19,231,672 | - | C1H5g29457 | CX5g037912 | LOC_Os05g38950 | Os05g0465100 | - | Detail |
| C2H5g24578 | 5:19,235,155-19,235,750 | - | C1H5g08488 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C2H5g17637 | 5:19,235,757-19,235,936 | - | C1H5g08488 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C2H5g18626 | 5:19,241,364-19,245,819 | + | C1H5g21670 | CX5g037984 | LOC_Os05g38980 | Os05g0465800 | - | Detail |
| C2H5g30441 | 5:19,252,568-19,253,730 | - | C1H5g02280 | CX5g037393 | LOC_Os05g38990 | Os05g0466100 | - | Detail |
| C2H5g26967 | 5:19,257,046-19,259,772 | - | C1H5g22492 | CX5g037000 | LOC_Os05g39000 | Os05g0466200 | - | Detail |
| C2H5g09767 | 5:19,262,798-19,263,109 | + | C1H5g21036 | CX5g040997 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| C2H5g13581 | 5:19,264,419-19,265,837 | - | C1H5g31118 | CX5g039804 | LOC_Os05g39060 | Os05g0126800 | - | Detail |
| C2H5g06731 | 5:19,269,933-19,272,096 | + | C1H5g05117 | CX5g039967 | LOC_Os05g39070 | Os05g0466800 | - | Detail |
| C2H5g29590 | 5:19,272,713-19,277,747 | - | C1H5g14576 | CX5g037557 | LOC_Os05g39080 | Os05g0466900 | - | Detail |
| C2H5g06761 | 5:19,280,042-19,285,362 | - | C1H5g19503 | CX5g037206 | LOC_Os05g39090 | Os05g0467000 | OsCPK16 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003910 | 1:3,315,059-3,320,736 | + | C1H1g19078 | C2H1g11564 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| CX1g004606 | 1:3,321,747-3,322,576 | - | C1H1g28967 | C2H1g09395 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| CX1g005118 | 1:3,330,148-3,330,483 | - | - | C2H1g09850 | LOC_Os01g07890 | Os01g0174100 | - | Detail |
| CX1g006673 | 1:3,332,165-3,336,049 | - | C1H1g06431 | C2H1g12786 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| CX1g002389 | 1:3,337,361-3,337,609 | + | - | - | - | Os01g0174400 | - | Detail |
| CX1g002809 | 1:3,338,648-3,343,025 | - | C1H1g15491 | C2H1g16794 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| CX1g001951 | 1:3,343,904-3,344,056 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g001687 | 1:3,347,506-3,349,544 | - | C1H1g13210 | C2H1g29949 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| CX1g001175 | 1:3,355,456-3,358,566 | + | C1H1g31867 | C2H1g27987 | LOC_Os01g07950 | Os01g0174900 | - | Detail |
| CX1g003986 | 1:3,359,800-3,363,346 | - | C1H1g24398 | C2H1g22647 | LOC_Os01g07960 | Os01g0175000 | - | Detail |
| CX1g001645 | 1:3,367,586-3,368,397 | + | - | C2H1g20408 | - | - | - | Detail |
| CX1g000025 | 1:3,371,216-3,371,626 | - | - | C2H1g24660 | LOC_Os01g07970 | Os01g0175100 | - | Detail |
| CX1g004096 | 1:3,374,527-3,380,369 | - | C1H1g18087 | C2H1g30617 | LOC_Os01g08000 | Os01g0175400 | - | Detail |
| CX1g000676 | 1:3,382,035-3,383,465 | + | - | C2H1g07461 | LOC_Os01g08010 | Os01g0175500 | - | Detail |
| CX1g001976 | 1:3,384,398-3,388,903 | - | C1H1g05589 | C2H1g23906 | LOC_Os01g08020 | Os01g0175600 | BOR2, OsBOR2, OsBOR3 | Detail |
| CX1g006212 | 1:3,402,401-3,406,902 | - | C1H1g28606 | C2H1g04507 | LOC_Os01g08020 | Os01g0175700 | BOR2, OsBOR2, OsBOR3 | Detail |
| CX1g003747 | 1:3,414,236-3,415,741 | - | C1H1g02538 | C2H1g06989 | LOC_Os01g08110 | Os01g0175850 | - | Detail |
| CX1g006769 | 1:3,417,280-3,419,305 | + | C1H1g24276 | C2H1g10547 | LOC_Os01g08090 | Os01g0176000 | - | Detail |
| CX1g003023 | 1:3,420,347-3,422,130 | + | C1H1g30308 | C2H1g11095 | LOC_Os01g08100 | Os01g0176100 | - | Detail |
| CX1g005553 | 1:3,423,187-3,425,188 | + | C1H1g02538 | C2H1g17460 | LOC_Os01g08110 | Os01g0176200 | - | Detail |