| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24219 | 3:9,407,341-9,407,955 | + | C1H3g00497 | CX3g025566 | LOC_Os03g18990 | Os03g0301900 | - | Detail |
| C2H3g19658 | 3:9,410,763-9,411,527 | + | C1H3g25455 | - | LOC_Os03g19000 | Os03g0301950 | PEX11-2, OsPEX11-2, OsPEX11-5 | Detail |
| C2H3g01269 | 3:9,412,970-9,415,375 | + | C1H3g00671 | - | LOC_Os03g19010 | Os03g0302000 | PEX11-3, OsPEX11-3, OsPEX11 | Detail |
| C2H3g16033 | 3:9,416,864-9,420,075 | + | C1H3g25691 | CX3g029358 | LOC_Os03g19020 | Os03g0302200 | OsHIRP1 | Detail |
| C2H3g22160 | 3:9,425,813-9,426,652 | + | C1H3g01186 | CX3g025355 | LOC_Os03g19040 | Os03g0302500 | - | Detail |
| C2H3g04749 | 3:9,429,430-9,431,816 | + | C1H3g04602 | CX3g031208 | LOC_Os03g19059 | Os03g0302700 | - | Detail |
| C2H3g01569 | 3:9,433,708-9,434,355 | + | C1H3g22154 | CX3g027498 | LOC_Os03g19070 | Os03g0302800 | - | Detail |
| C2H3g02069 | 3:9,448,181-9,452,673 | + | C1H3g20481 | CX3g029770 | LOC_Os03g19080 | Os03g0302900 | SSD1 | Detail |
| C2H3g07365 | 3:9,456,527-9,457,600 | + | C1H3g20097 | CX3g030525 | LOC_Os03g19090 | Os03g0303100 | - | Detail |
| C2H3g09593 | 3:9,465,902-9,472,378 | - | C1H3g25874 | CX3g027281 | LOC_Os03g19120 | Os03g0303500 | OsP1 | Detail |
| C2H3g00606 | 3:9,492,656-9,493,476 | - | C1H3g30781 | CX3g028949 | LOC_Os03g19170 | Os03g0304100 | - | Detail |
| C2H3g12534 | 3:9,496,523-9,503,702 | + | C1H3g08647 | CX3g027589 | LOC_Os03g19190 | Os03g0304400 | - | Detail |
| C2H3g09070 | 3:9,516,974-9,520,456 | - | C1H3g21470 | CX3g026232 | LOC_Os03g19200 | Os03g0304500 | - | Detail |
| C2H3g20134 | 3:9,542,594-9,545,448 | - | C1H3g06043 | - | LOC_Os03g19220 | Os03g0304800 | - | Detail |
| C2H3g11777 | 3:9,555,282-9,559,401 | - | C1H3g10550 | CX3g026365 | LOC_Os03g19240 | Os03g0305000 | - | Detail |
| C2H3g17079 | 3:9,561,884-9,565,492 | - | C1H3g05747 | CX3g028640 | LOC_Os03g19250 | Os03g0305100 | - | Detail |
| C2H3g13465 | 3:9,570,078-9,570,716 | - | C1H3g00125 | CX3g029782 | LOC_Os03g19260 | Os03g0305200 | - | Detail |
| C2H3g28502 | 3:9,578,640-9,579,512 | - | C1H3g18796 | CX3g028201 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| C2H3g12913 | 3:9,582,082-9,586,519 | + | C1H3g22639 | CX3g030535 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| C2H3g24123 | 3:9,587,286-9,588,648 | + | C1H3g06291 | CX3g026844 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003910 | 1:3,315,059-3,320,736 | + | C1H1g19078 | C2H1g11564 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| CX1g004606 | 1:3,321,747-3,322,576 | - | C1H1g28967 | C2H1g09395 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| CX1g005118 | 1:3,330,148-3,330,483 | - | - | C2H1g09850 | LOC_Os01g07890 | Os01g0174100 | - | Detail |
| CX1g006673 | 1:3,332,165-3,336,049 | - | C1H1g06431 | C2H1g12786 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| CX1g002389 | 1:3,337,361-3,337,609 | + | - | - | - | Os01g0174400 | - | Detail |
| CX1g002809 | 1:3,338,648-3,343,025 | - | C1H1g15491 | C2H1g16794 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| CX1g001951 | 1:3,343,904-3,344,056 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g001687 | 1:3,347,506-3,349,544 | - | C1H1g13210 | C2H1g29949 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| CX1g001175 | 1:3,355,456-3,358,566 | + | C1H1g31867 | C2H1g27987 | LOC_Os01g07950 | Os01g0174900 | - | Detail |
| CX1g003986 | 1:3,359,800-3,363,346 | - | C1H1g24398 | C2H1g22647 | LOC_Os01g07960 | Os01g0175000 | - | Detail |
| CX1g001645 | 1:3,367,586-3,368,397 | + | - | C2H1g20408 | - | - | - | Detail |
| CX1g000025 | 1:3,371,216-3,371,626 | - | - | C2H1g24660 | LOC_Os01g07970 | Os01g0175100 | - | Detail |
| CX1g004096 | 1:3,374,527-3,380,369 | - | C1H1g18087 | C2H1g30617 | LOC_Os01g08000 | Os01g0175400 | - | Detail |
| CX1g000676 | 1:3,382,035-3,383,465 | + | - | C2H1g07461 | LOC_Os01g08010 | Os01g0175500 | - | Detail |
| CX1g001976 | 1:3,384,398-3,388,903 | - | C1H1g05589 | C2H1g23906 | LOC_Os01g08020 | Os01g0175600 | BOR2, OsBOR2, OsBOR3 | Detail |
| CX1g006212 | 1:3,402,401-3,406,902 | - | C1H1g28606 | C2H1g04507 | LOC_Os01g08020 | Os01g0175700 | BOR2, OsBOR2, OsBOR3 | Detail |
| CX1g003747 | 1:3,414,236-3,415,741 | - | C1H1g02538 | C2H1g06989 | LOC_Os01g08110 | Os01g0175850 | - | Detail |
| CX1g006769 | 1:3,417,280-3,419,305 | + | C1H1g24276 | C2H1g10547 | LOC_Os01g08090 | Os01g0176000 | - | Detail |
| CX1g003023 | 1:3,420,347-3,422,130 | + | C1H1g30308 | C2H1g11095 | LOC_Os01g08100 | Os01g0176100 | - | Detail |
| CX1g005553 | 1:3,423,187-3,425,188 | + | C1H1g02538 | C2H1g17460 | LOC_Os01g08110 | Os01g0176200 | - | Detail |