| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g07096 | 2:26,569,714-26,572,122 | + | C2H2g00990 | CX2g019985 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| C1H2g17263 | 2:26,573,070-26,574,402 | - | C2H2g18781 | CX2g018946 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| C1H2g20817 | 2:26,576,566-26,579,572 | - | C2H2g13276 | CX2g022668 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| C1H2g05464 | 2:26,582,274-26,587,006 | + | C2H2g21592 | CX2g021133 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| C1H2g24987 | 2:26,590,387-26,594,037 | - | C2H2g02395 | CX2g022517 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| C1H2g25791 | 2:26,609,172-26,612,861 | - | C2H2g25196 | CX2g022082 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| C1H2g27039 | 2:26,635,044-26,639,407 | + | C2H2g15528 | CX2g023957 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| C1H2g16179 | 2:26,639,960-26,641,086 | - | C2H2g23415 | CX2g020103 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| C1H2g12582 | 2:26,642,996-26,644,943 | + | C2H2g21402 | CX2g021360 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| C1H2g09622 | 2:26,647,658-26,651,101 | + | C2H2g02080 | CX2g022772 | LOC_Os02g47360 | Os02g0702000 | OSOTP51, SSA1 | Detail |
| C1H2g18788 | 2:26,657,284-26,660,559 | + | C2H2g00977 | CX2g019179 | LOC_Os02g47400 | Os02g0702400 | - | Detail |
| C1H2g17296 | 2:26,661,748-26,670,457 | - | C2H2g26384 | CX2g023268 | LOC_Os02g47410 | Os02g0702500 | - | Detail |
| C1H2g14738 | 2:26,675,160-26,681,475 | - | C2H2g00034 | CX2g020864 | LOC_Os02g47420 | Os02g0702600 | - | Detail |
| C1H2g23661 | 2:26,690,376-26,696,845 | - | C2H2g04827 | CX2g020499 | LOC_Os02g47440 | Os02g0702800 | OsSYP21 | Detail |
| C1H2g10840 | 2:26,700,548-26,701,372 | + | C2H2g13380 | CX2g023044 | LOC_Os02g47450 | Os02g0703300 | - | Detail |
| C1H2g06866 | 2:26,713,872-26,715,795 | + | C2H2g24088 | CX2g021944 | LOC_Os02g45280 | Os02g0703600 | OsABA8ox1, CYP707A5 | Detail |
| C1H2g27896 | 2:26,727,221-26,730,378 | + | C2H2g26119 | CX2g022994 | LOC_Os02g47500 | Os02g0703900 | - | Detail |
| C1H2g28522 | 2:26,744,905-26,749,591 | - | C2H2g28790 | CX2g020240 | LOC_Os02g47560 | Os02g0704300 | OsDNA2_6 | Detail |
| C1H2g16636 | 2:26,753,027-26,755,301 | + | C2H2g08817 | CX2g021465 | LOC_Os02g47570 | Os02g0704500 | - | Detail |
| C1H2g16073 | 2:26,755,896-26,760,316 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003910 | 1:3,315,059-3,320,736 | + | C1H1g19078 | C2H1g11564 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| CX1g004606 | 1:3,321,747-3,322,576 | - | C1H1g28967 | C2H1g09395 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| CX1g005118 | 1:3,330,148-3,330,483 | - | - | C2H1g09850 | LOC_Os01g07890 | Os01g0174100 | - | Detail |
| CX1g006673 | 1:3,332,165-3,336,049 | - | C1H1g06431 | C2H1g12786 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| CX1g002389 | 1:3,337,361-3,337,609 | + | - | - | - | Os01g0174400 | - | Detail |
| CX1g002809 | 1:3,338,648-3,343,025 | - | C1H1g15491 | C2H1g16794 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| CX1g001951 | 1:3,343,904-3,344,056 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g001687 | 1:3,347,506-3,349,544 | - | C1H1g13210 | C2H1g29949 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| CX1g001175 | 1:3,355,456-3,358,566 | + | C1H1g31867 | C2H1g27987 | LOC_Os01g07950 | Os01g0174900 | - | Detail |
| CX1g003986 | 1:3,359,800-3,363,346 | - | C1H1g24398 | C2H1g22647 | LOC_Os01g07960 | Os01g0175000 | - | Detail |
| CX1g001645 | 1:3,367,586-3,368,397 | + | - | C2H1g20408 | - | - | - | Detail |
| CX1g000025 | 1:3,371,216-3,371,626 | - | - | C2H1g24660 | LOC_Os01g07970 | Os01g0175100 | - | Detail |
| CX1g004096 | 1:3,374,527-3,380,369 | - | C1H1g18087 | C2H1g30617 | LOC_Os01g08000 | Os01g0175400 | - | Detail |
| CX1g000676 | 1:3,382,035-3,383,465 | + | - | C2H1g07461 | LOC_Os01g08010 | Os01g0175500 | - | Detail |
| CX1g001976 | 1:3,384,398-3,388,903 | - | C1H1g05589 | C2H1g23906 | LOC_Os01g08020 | Os01g0175600 | BOR2, OsBOR2, OsBOR3 | Detail |
| CX1g006212 | 1:3,402,401-3,406,902 | - | C1H1g28606 | C2H1g04507 | LOC_Os01g08020 | Os01g0175700 | BOR2, OsBOR2, OsBOR3 | Detail |
| CX1g003747 | 1:3,414,236-3,415,741 | - | C1H1g02538 | C2H1g06989 | LOC_Os01g08110 | Os01g0175850 | - | Detail |
| CX1g006769 | 1:3,417,280-3,419,305 | + | C1H1g24276 | C2H1g10547 | LOC_Os01g08090 | Os01g0176000 | - | Detail |
| CX1g003023 | 1:3,420,347-3,422,130 | + | C1H1g30308 | C2H1g11095 | LOC_Os01g08100 | Os01g0176100 | - | Detail |
| CX1g005553 | 1:3,423,187-3,425,188 | + | C1H1g02538 | C2H1g17460 | LOC_Os01g08110 | Os01g0176200 | - | Detail |