| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g27377 | 2:31,147,215-31,151,596 | + | C1H2g22350 | CX2g022127 | LOC_Os02g55910 | Os02g0802700 | OsMGD2 | Detail |
| C2H2g20108 | 2:31,156,425-31,156,652 | + | C1H8g21125 | CX8g052993 | - | - | - | Detail |
| C2H2g19776 | 2:31,161,375-31,164,320 | + | C1H2g19124 | CX2g023429 | LOC_Os02g55940 | Os02g0803200 | - | Detail |
| C2H2g02168 | 2:31,164,868-31,173,358 | + | C1H2g20796 | CX2g020375 | LOC_Os02g55950 | Os02g0803250 | - | Detail |
| C2H2g12868 | 2:31,165,042-31,169,443 | - | C1H2g16610 | - | - | - | - | Detail |
| C2H2g09719 | 2:31,177,748-31,181,206 | + | C1H2g28140 | CX2g020265 | LOC_Os02g55970 | Os02g0803300 | - | Detail |
| C2H2g22479 | 2:31,182,000-31,182,890 | - | C1H2g29422 | CX2g018868 | LOC_Os02g55980 | Os02g0803400 | - | Detail |
| C2H2g05755 | 2:31,184,987-31,186,499 | + | C1H2g14622 | CX2g022206 | LOC_Os02g55990 | Os02g0803600 | - | Detail |
| C2H2g01956 | 2:31,186,968-31,190,821 | - | C1H2g12587 | CX2g021842 | LOC_Os02g56000 | Os02g0803700 | - | Detail |
| C2H2g27448 | 2:31,222,073-31,222,944 | - | C1H6g22975 | CX2g021501 | LOC_Os02g56014 | Os02g0804100 | - | Detail |
| C2H2g02958 | 2:31,222,585-31,225,421 | + | C1H2g20947 | CX2g023214 | LOC_Os02g56020 | Os02g0804300 | - | Detail |
| C2H2g06460 | 2:31,225,608-31,226,339 | + | C1H2g11666 | CX2g019813 | LOC_Os02g56030 | Os02g0804400 | - | Detail |
| C2H2g06255 | 2:31,226,706-31,233,843 | - | C1H2g07400 | CX2g020092 | LOC_Os02g56040 | Os02g0804500 | OsDjA2 | Detail |
| C2H2g30585 | 2:31,235,588-31,239,035 | - | C1H2g26632 | CX2g021763 | LOC_Os02g56050 | Os02g0804600 | - | Detail |
| C2H2g02634 | 2:31,240,060-31,242,017 | + | C1H2g22511 | - | LOC_Os02g56090 | Os02g0804800 | - | Detail |
| C2H2g25841 | 2:31,243,789-31,248,191 | + | C1H2g22356 | CX2g021393 | LOC_Os02g56100 | Os02g0804900 | RNRL2 | Detail |
| C2H2g24175 | 2:31,251,377-31,259,875 | - | C1H2g06681 | CX2g021776 | LOC_Os02g56110 | Os02g0805000 | - | Detail |
| C2H2g17406 | 2:31,265,696-31,266,498 | + | C1H2g26955 | CX2g023851 | LOC_Os02g56120 | Os02g0805100 | - | Detail |
| C2H2g05865 | 2:31,268,106-31,269,817 | + | C1H2g10518 | CX2g022924 | LOC_Os02g56130 | Os02g0805200 | OsPCNA | Detail |
| C2H2g03605 | 2:31,271,138-31,272,864 | - | C1H2g21301 | CX2g024641 | LOC_Os02g56140 | Os02g0805250 | OsbHLH107 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003195 | 1:35,533,216-35,538,913 | + | C1H1g16048 | C2H1g21628 | LOC_Os01g69120 | Os01g0920300 | - | Detail |
| CX1g001019 | 1:35,541,415-35,548,915 | - | C1H1g14453 | C2H1g17133 | LOC_Os01g69130 | Os01g0920400 | - | Detail |
| CX1g002078 | 1:35,585,533-35,593,479 | + | C1H1g30764 | C2H1g30128 | LOC_Os01g69210 | Os01g0921200 | OsMOGS | Detail |
| CX1g003739 | 1:35,595,240-35,597,635 | + | C1H1g26651 | C2H1g16671 | LOC_Os01g69220 | Os01g0921300 | - | Detail |
| CX1g001141 | 1:35,600,500-35,601,756 | + | C1H1g12748 | C2H1g02106 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| CX1g000619 | 1:35,603,412-35,605,003 | - | C1H1g17623 | C2H1g13527 | LOC_Os01g69240 | Os01g0921500 | - | Detail |
| CX1g000315 | 1:35,605,476-35,608,834 | + | C1H1g22149 | C2H1g04376 | LOC_Os01g69250 | Os01g0921600 | - | Detail |
| CX1g005205 | 1:35,621,998-35,623,488 | - | C1H1g03696 | C2H1g29960 | LOC_Os01g69270 | Os01g0921800 | WCR1 | Detail |
| CX1g003439 | 1:35,641,335-35,642,570 | + | C1H1g00715 | C2H1g26525 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| CX1g004779 | 1:35,649,828-35,649,980 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g002270 | 1:35,651,295-35,652,530 | - | C1H1g14053 | - | LOC_Os01g69290 | Os01g0922100 | - | Detail |
| CX1g005151 | 1:35,664,209-35,664,361 | + | - | - | - | - | - | Detail |
| CX1g003818 | 1:35,674,885-35,675,112 | - | - | - | - | - | - | Detail |
| CX1g004693 | 1:35,678,915-35,682,419 | + | C1H1g03830 | C2H1g09433 | LOC_Os01g69830 | Os01g0922600 | OsSPL2 | Detail |
| CX1g002100 | 1:35,684,215-35,684,469 | - | C1H1g24548 | - | LOC_Os01g69840 | Os01g0922700 | - | Detail |
| CX1g007002 | 1:35,726,644-35,726,889 | + | C1H1g05284 | - | LOC_Os01g69870 | Os01g0923000 | - | Detail |
| CX1g004462 | 1:35,732,769-35,736,231 | + | C1H1g11016 | C2H1g01640 | LOC_Os01g69900 | Os01g0923300 | - | Detail |
| CX1g004735 | 1:35,739,923-35,745,218 | + | C1H1g13300 | C2H1g04390 | LOC_Os01g69910 | Os01g0923600 | - | Detail |
| CX1g001516 | 1:35,747,362-35,751,763 | - | C1H1g01597 | C2H1g25723 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| CX1g006361 | 1:35,784,526-35,786,760 | + | C1H1g00107 | C2H1g29022 | LOC_Os01g69930 | Os01g0923800 | - | Detail |