| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g20692 | 2:3,060,464-3,065,717 | - | C1H2g17118 | CX2g021601 | LOC_Os02g06920 | Os02g0165000 | - | Detail |
| C2H2g16079 | 2:3,069,988-3,072,529 | + | C1H2g01650 | CX2g019152 | LOC_Os02g06930 | Os02g0165100 | - | Detail |
| C2H2g27607 | 2:3,155,405-3,158,804 | + | C1H2g23632 | CX2g024294 | LOC_Os02g07040 | Os02g0167000 | - | Detail |
| C2H2g29468 | 2:3,159,767-3,162,381 | + | C1H2g16723 | CX2g019411 | LOC_Os02g07044 | Os02g0167100 | - | Detail |
| C2H2g18240 | 2:3,168,991-3,171,917 | + | C1H2g27502 | CX2g022042 | LOC_Os02g07060 | Os02g0167300 | - | Detail |
| C2H2g24332 | 2:3,172,966-3,180,822 | - | C1H2g31793 | CX2g021350 | LOC_Os02g07070 | Os02g0167500 | LowAC1 | Detail |
| C2H2g21001 | 2:3,202,475-3,202,852 | + | C1H2g24765 | CX2g022899 | LOC_Os02g07110 | Os02g0445100 | - | Detail |
| C2H2g11696 | 2:3,206,702-3,216,701 | - | C1H2g25293 | CX2g021417 | LOC_Os02g07120 | Os02g0167700 | OsCAND1 | Detail |
| C2H2g19465 | 2:3,223,262-3,225,187 | - | C1H2g15991 | CX2g019496 | LOC_Os02g07160 | Os02g0168100 | OsHPPD | Detail |
| C2H2g21644 | 2:3,230,343-3,231,965 | - | C1H2g12427 | CX2g021826 | LOC_Os02g07170 | Os02g0168200 | - | Detail |
| C2H2g14957 | 2:3,235,166-3,238,330 | + | C1H2g27005 | CX2g022739 | LOC_Os02g07180 | Os02g0168300 | - | Detail |
| C2H2g15308 | 2:3,242,519-3,247,680 | + | C1H2g17697 | CX2g023861 | LOC_Os02g07190 | Os02g0168400 | - | Detail |
| C2H2g27598 | 2:3,249,548-3,251,603 | + | C1H2g15097 | CX2g019993 | LOC_Os02g07200 | Os02g0168500 | - | Detail |
| C2H2g30613 | 2:3,252,757-3,255,389 | - | C1H2g02992 | CX2g020274 | LOC_Os02g07210 | Os02g0168600 | - | Detail |
| C2H2g22535 | 2:3,259,890-3,261,785 | - | C1H2g24249 | CX2g022989 | LOC_Os02g07220 | Os02g0168700 | - | Detail |
| C2H2g29143 | 2:3,263,601-3,266,496 | + | C1H2g16743 | CX2g019641 | LOC_Os02g07230 | Os02g0168800 | - | Detail |
| C2H2g05298 | 2:3,267,042-3,268,348 | - | C1H2g05199 | CX2g023253 | LOC_Os02g07240 | Os02g0168900 | - | Detail |
| C2H2g28592 | 2:3,269,187-3,272,882 | - | C1H2g08763 | CX2g023357 | LOC_Os02g07250 | Os02g0169000 | - | Detail |
| C2H2g19444 | 2:3,276,297-3,280,134 | + | C1H2g16238 | CX2g020247 | LOC_Os02g07260 | Os02g0169300 | - | Detail |
| C2H2g02121 | 2:3,287,961-3,294,924 | - | C1H2g08697 | CX2g023065 | LOC_Os02g07310 | Os02g0169400 | OsAGO17 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003195 | 1:35,533,216-35,538,913 | + | C1H1g16048 | C2H1g21628 | LOC_Os01g69120 | Os01g0920300 | - | Detail |
| CX1g001019 | 1:35,541,415-35,548,915 | - | C1H1g14453 | C2H1g17133 | LOC_Os01g69130 | Os01g0920400 | - | Detail |
| CX1g002078 | 1:35,585,533-35,593,479 | + | C1H1g30764 | C2H1g30128 | LOC_Os01g69210 | Os01g0921200 | OsMOGS | Detail |
| CX1g003739 | 1:35,595,240-35,597,635 | + | C1H1g26651 | C2H1g16671 | LOC_Os01g69220 | Os01g0921300 | - | Detail |
| CX1g001141 | 1:35,600,500-35,601,756 | + | C1H1g12748 | C2H1g02106 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| CX1g000619 | 1:35,603,412-35,605,003 | - | C1H1g17623 | C2H1g13527 | LOC_Os01g69240 | Os01g0921500 | - | Detail |
| CX1g000315 | 1:35,605,476-35,608,834 | + | C1H1g22149 | C2H1g04376 | LOC_Os01g69250 | Os01g0921600 | - | Detail |
| CX1g005205 | 1:35,621,998-35,623,488 | - | C1H1g03696 | C2H1g29960 | LOC_Os01g69270 | Os01g0921800 | WCR1 | Detail |
| CX1g003439 | 1:35,641,335-35,642,570 | + | C1H1g00715 | C2H1g26525 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| CX1g004779 | 1:35,649,828-35,649,980 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g002270 | 1:35,651,295-35,652,530 | - | C1H1g14053 | - | LOC_Os01g69290 | Os01g0922100 | - | Detail |
| CX1g005151 | 1:35,664,209-35,664,361 | + | - | - | - | - | - | Detail |
| CX1g003818 | 1:35,674,885-35,675,112 | - | - | - | - | - | - | Detail |
| CX1g004693 | 1:35,678,915-35,682,419 | + | C1H1g03830 | C2H1g09433 | LOC_Os01g69830 | Os01g0922600 | OsSPL2 | Detail |
| CX1g002100 | 1:35,684,215-35,684,469 | - | C1H1g24548 | - | LOC_Os01g69840 | Os01g0922700 | - | Detail |
| CX1g007002 | 1:35,726,644-35,726,889 | + | C1H1g05284 | - | LOC_Os01g69870 | Os01g0923000 | - | Detail |
| CX1g004462 | 1:35,732,769-35,736,231 | + | C1H1g11016 | C2H1g01640 | LOC_Os01g69900 | Os01g0923300 | - | Detail |
| CX1g004735 | 1:35,739,923-35,745,218 | + | C1H1g13300 | C2H1g04390 | LOC_Os01g69910 | Os01g0923600 | - | Detail |
| CX1g001516 | 1:35,747,362-35,751,763 | - | C1H1g01597 | C2H1g25723 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| CX1g006361 | 1:35,784,526-35,786,760 | + | C1H1g00107 | C2H1g29022 | LOC_Os01g69930 | Os01g0923800 | - | Detail |