| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g25852 | 12:22,722,482-22,725,521 | - | C1H12g22744 | CX12g015901 | LOC_Os12g43560 | Os12g0631200 | - | Detail |
| C2H12g12885 | 12:22,740,829-22,743,535 | + | C1H12g14996 | CX12g018492 | LOC_Os12g43580 | Os12g0631600 | - | Detail |
| C2H12g12624 | 12:22,746,490-22,751,517 | - | C1H12g31710 | CX12g017284 | LOC_Os12g43590 | Os12g0631800 | - | Detail |
| C2H12g20777 | 12:22,754,471-22,755,378 | + | C1H12g07284 | CX12g016267 | LOC_Os12g43600 | Os12g0632000 | GRP162 | Detail |
| C2H12g23438 | 12:22,756,363-22,757,458 | - | C1H12g03802 | CX12g015117 | - | - | - | Detail |
| C2H12g01034 | 12:22,777,024-22,778,495 | + | C1H12g13426 | CX12g016286 | LOC_Os12g43620 | Os12g0632600 | - | Detail |
| C2H12g20024 | 12:22,783,033-22,787,607 | - | C1H12g04328 | CX12g015301 | LOC_Os12g43630 | Os12g0632700 | OsMDH12.1 | Detail |
| C2H12g27312 | 12:22,798,949-22,801,969 | + | C1H12g10372 | CX12g016541 | LOC_Os12g43640 | Os12g0632800 | OsRLK7, OsRLK7-1, MEG1 | Detail |
| C2H12g28515 | 12:22,810,714-22,814,562 | + | C1H12g06527 | CX12g016694 | LOC_Os12g43660 | Os12g0632900 | - | Detail |
| C2H12g15659 | 12:22,816,633-22,820,138 | - | C1H12g30873 | CX12g017780 | LOC_Os12g43664 | Os12g0633000 | - | Detail |
| C2H12g01218 | 12:22,821,082-22,823,048 | - | C1H12g26820 | CX12g015772 | LOC_Os12g43670 | Os12g0633200 | - | Detail |
| C2H12g01435 | 12:22,822,954-22,823,214 | + | C1H12g26413 | - | - | Os12g0633301 | - | Detail |
| C2H12g14505 | 12:22,826,491-22,826,874 | - | C1H12g13713 | CX12g017271 | LOC_Os12g43700 | Os12g0633400 | - | Detail |
| C2H12g00958 | 12:22,826,919-22,827,803 | - | C1H12g06041 | CX12g017271 | LOC_Os12g43700 | Os12g0633400 | - | Detail |
| C2H12g21638 | 12:22,832,211-22,832,537 | + | C1H12g19094 | CX12g016957 | LOC_Os12g37690 | Os12g0633501 | - | Detail |
| C2H12g22600 | 12:22,837,287-22,843,115 | - | C1H12g26279 | CX12g017722 | LOC_Os12g43720 | Os12g0633600 | - | Detail |
| C2H12g28210 | 12:22,850,760-22,851,644 | - | C1H12g00546 | CX12g016387 | LOC_Os12g43740 | Os12g0633800 | - | Detail |
| C2H12g02573 | 12:22,854,744-22,855,617 | + | C1H12g12854 | CX12g016782 | LOC_Os12g43750 | Os12g0634000 | - | Detail |
| C2H12g02474 | 12:22,858,770-22,859,640 | - | C1H12g07099 | CX12g015900 | LOC_Os12g43780 | Os12g0634400 | - | Detail |
| C2H12g10535 | 12:22,864,491-22,865,006 | - | C1H12g31416 | CX12g016721 | LOC_Os12g43790 | Os12g0634500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003195 | 1:35,533,216-35,538,913 | + | C1H1g16048 | C2H1g21628 | LOC_Os01g69120 | Os01g0920300 | - | Detail |
| CX1g001019 | 1:35,541,415-35,548,915 | - | C1H1g14453 | C2H1g17133 | LOC_Os01g69130 | Os01g0920400 | - | Detail |
| CX1g002078 | 1:35,585,533-35,593,479 | + | C1H1g30764 | C2H1g30128 | LOC_Os01g69210 | Os01g0921200 | OsMOGS | Detail |
| CX1g003739 | 1:35,595,240-35,597,635 | + | C1H1g26651 | C2H1g16671 | LOC_Os01g69220 | Os01g0921300 | - | Detail |
| CX1g001141 | 1:35,600,500-35,601,756 | + | C1H1g12748 | C2H1g02106 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| CX1g000619 | 1:35,603,412-35,605,003 | - | C1H1g17623 | C2H1g13527 | LOC_Os01g69240 | Os01g0921500 | - | Detail |
| CX1g000315 | 1:35,605,476-35,608,834 | + | C1H1g22149 | C2H1g04376 | LOC_Os01g69250 | Os01g0921600 | - | Detail |
| CX1g005205 | 1:35,621,998-35,623,488 | - | C1H1g03696 | C2H1g29960 | LOC_Os01g69270 | Os01g0921800 | WCR1 | Detail |
| CX1g003439 | 1:35,641,335-35,642,570 | + | C1H1g00715 | C2H1g26525 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| CX1g004779 | 1:35,649,828-35,649,980 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g002270 | 1:35,651,295-35,652,530 | - | C1H1g14053 | - | LOC_Os01g69290 | Os01g0922100 | - | Detail |
| CX1g005151 | 1:35,664,209-35,664,361 | + | - | - | - | - | - | Detail |
| CX1g003818 | 1:35,674,885-35,675,112 | - | - | - | - | - | - | Detail |
| CX1g004693 | 1:35,678,915-35,682,419 | + | C1H1g03830 | C2H1g09433 | LOC_Os01g69830 | Os01g0922600 | OsSPL2 | Detail |
| CX1g002100 | 1:35,684,215-35,684,469 | - | C1H1g24548 | - | LOC_Os01g69840 | Os01g0922700 | - | Detail |
| CX1g007002 | 1:35,726,644-35,726,889 | + | C1H1g05284 | - | LOC_Os01g69870 | Os01g0923000 | - | Detail |
| CX1g004462 | 1:35,732,769-35,736,231 | + | C1H1g11016 | C2H1g01640 | LOC_Os01g69900 | Os01g0923300 | - | Detail |
| CX1g004735 | 1:35,739,923-35,745,218 | + | C1H1g13300 | C2H1g04390 | LOC_Os01g69910 | Os01g0923600 | - | Detail |
| CX1g001516 | 1:35,747,362-35,751,763 | - | C1H1g01597 | C2H1g25723 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| CX1g006361 | 1:35,784,526-35,786,760 | + | C1H1g00107 | C2H1g29022 | LOC_Os01g69930 | Os01g0923800 | - | Detail |