| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29368 | 4:30,507,658-30,513,591 | + | C1H4g17177 | CX4g034793 | LOC_Os04g59320 | Os04g0689400 | - | Detail |
| C2H4g10646 | 4:30,514,406-30,515,925 | + | C1H4g15962 | CX4g031663 | LOC_Os04g59330 | Os04g0689500 | - | Detail |
| C2H4g21499 | 4:30,520,045-30,521,017 | + | C1H4g05384 | CX4g036307 | LOC_Os04g59340 | Os04g0689700 | - | Detail |
| C2H4g01472 | 4:30,523,602-30,524,699 | + | C1H4g05536 | CX4g034950 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C2H4g12610 | 4:30,526,563-30,530,889 | + | C1H4g14916 | CX4g032101 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C2H4g18186 | 4:30,541,288-30,542,675 | + | C1H4g15741 | CX4g031741 | LOC_Os04g59370 | Os04g0689900 | - | Detail |
| C2H4g13638 | 4:30,551,643-30,554,062 | + | C1H4g21540 | CX4g034943 | LOC_Os04g59380 | Os04g0690100 | - | Detail |
| C2H4g23794 | 4:30,561,339-30,567,049 | + | C1H4g10285 | CX4g032712 | LOC_Os04g59394 | Os04g0690300 | - | Detail |
| C2H4g10236 | 4:30,568,757-30,572,207 | + | C1H4g14673 | CX4g035891 | LOC_Os04g59400 | Os04g0690400 | - | Detail |
| C2H4g10344 | 4:30,578,674-30,579,488 | + | C1H4g07117 | CX4g034143 | LOC_Os04g59420 | Os04g0690500 | - | Detail |
| C2H4g01830 | 4:30,580,591-30,584,096 | - | C1H4g16012 | CX4g032346 | LOC_Os04g59430 | Os04g0690600 | - | Detail |
| C2H4g21324 | 4:30,589,590-30,590,357 | + | - | - | LOC_Os04g59440 | Os04g0690800 | PSBS2, PsbS, OsPsbS2, PSII-S | Detail |
| C2H4g11677 | 4:30,594,897-30,596,851 | + | C1H4g05861 | CX4g034110 | LOC_Os04g59450 | Os04g0691100 | SAPK5, OsSAPK5 | Detail |
| C2H4g24101 | 4:30,597,364-30,606,211 | - | C1H4g07779 | CX4g036214 | LOC_Os04g59460 | Os04g0691200 | - | Detail |
| C2H4g14210 | 4:30,611,359-30,612,219 | - | C1H4g13585 | CX4g036345 | LOC_Os04g59470 | Os04g0691300 | - | Detail |
| C2H4g07706 | 4:30,613,775-30,616,115 | + | C1H4g12409 | CX4g035525 | LOC_Os04g59480 | Os04g0691400 | - | Detail |
| C2H4g03071 | 4:30,621,244-30,633,385 | + | C1H4g07625 | CX4g032924 | LOC_Os04g59494 | Os04g0691500 | - | Detail |
| C2H4g15610 | 4:30,633,797-30,634,228 | + | C1H4g01268 | - | - | Os04g0691600 | - | Detail |
| C2H4g09678 | 4:30,636,339-30,645,952 | - | C1H4g29823 | CX4g035435 | LOC_Os04g59510 | Os04g0691700 | - | Detail |
| C2H4g25533 | 4:30,645,582-30,645,842 | + | C1H4g24974 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000718 | 1:35,417,952-35,420,710 | - | C1H1g15326 | C2H1g23570 | LOC_Os01g68930 | Os01g0918100 | - | Detail |
| CX1g004987 | 1:35,423,099-35,424,744 | - | C1H1g26418 | C2H1g21641 | LOC_Os01g68940 | Os01g0918200 | OsSUMO2 | Detail |
| CX1g001688 | 1:35,425,867-35,427,744 | - | C1H1g25857 | C2H1g11840 | LOC_Os01g68950 | Os01g0918300 | - | Detail |
| CX1g006416 | 1:35,431,523-35,433,425 | + | C1H1g11841 | C2H1g12677 | LOC_Os01g68960 | Os01g0918400 | - | Detail |
| CX1g005729 | 1:35,434,628-35,437,248 | - | C1H1g09128 | C2H1g25003 | LOC_Os01g68970 | Os01g0918500 | RYMV2, CPR5-1, OsCPR5-1 | Detail |
| CX1g000425 | 1:35,442,889-35,445,960 | + | C1H1g18558 | C2H1g11154 | LOC_Os01g69010 | Os01g0919100 | OsFRDL4 | Detail |
| CX1g000646 | 1:35,446,923-35,447,777 | - | C1H1g10942 | C2H1g00829 | LOC_Os01g69020 | Os01g0635600 | - | Detail |
| CX1g007071 | 1:35,451,012-35,456,181 | - | C1H1g17122 | C2H1g17477 | LOC_Os01g69030 | Os01g0919400 | SPS1, sps1, OsSPS1, SPS | Detail |
| CX1g001011 | 1:35,460,821-35,461,257 | - | C1H1g18790 | C2H1g14732 | - | - | - | Detail |
| CX1g002654 | 1:35,462,389-35,466,788 | + | C1H1g24083 | C2H1g17144 | LOC_Os01g69040 | Os01g0919500 | - | Detail |
| CX1g001203 | 1:35,475,047-35,477,948 | + | C1H1g24488 | C2H1g22206 | LOC_Os01g69050 | Os01g0919600 | - | Detail |
| CX1g005901 | 1:35,478,869-35,481,950 | + | C1H1g20104 | C2H1g29537 | LOC_Os01g69060 | Os01g0919700 | - | Detail |
| CX1g003243 | 1:35,482,327-35,488,498 | - | C1H1g05233 | C2H1g27432 | LOC_Os01g69070 | Os01g0919800 | - | Detail |
| CX1g001439 | 1:35,489,391-35,489,591 | + | - | - | - | - | - | Detail |
| CX1g004468 | 1:35,492,498-35,496,068 | - | C1H1g07064 | C2H1g17576 | LOC_Os01g69080 | Os01g0919900 | - | Detail |
| CX1g000962 | 1:35,502,368-35,502,658 | + | - | - | - | - | - | Detail |
| CX1g001843 | 1:35,504,440-35,508,120 | - | C1H1g22004 | C2H1g29795 | LOC_Os01g69090 | Os01g0920000 | - | Detail |
| CX1g003295 | 1:35,525,487-35,527,454 | + | C1H1g22093 | C2H1g14245 | LOC_Os01g69100 | Os01g0920100 | - | Detail |
| CX1g000176 | 1:35,528,795-35,530,866 | - | C1H1g30726 | C2H1g29600 | LOC_Os01g69110 | Os01g0920200 | - | Detail |
| CX1g006265 | 1:35,532,922-35,533,077 | - | - | - | - | - | - | Detail |