| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g00375 | 12:12,028,445-12,049,245 | - | C1H12g14155 | CX12g015869 | LOC_Os12g24170 | Os12g0429200 | - | Detail |
| C2H12g22470 | 12:12,079,801-12,080,399 | + | C1H12g03493 | CX12g018105 | - | Os12g0430900 | - | Detail |
| C2H12g14630 | 12:12,081,405-12,082,279 | + | C1H12g20362 | CX12g018105 | LOC_Os12g24240 | Os12g0430900 | - | Detail |
| C2H12g09366 | 12:12,082,630-12,096,521 | - | C1H12g01462 | CX12g016236 | LOC_Os12g24250 | Os12g0430000 | - | Detail |
| C2H12g04517 | 12:12,166,558-12,168,246 | + | C1H12g02746 | CX12g018132 | LOC_Os12g24320 | Os12g0431100 | - | Detail |
| C2H12g14972 | 12:12,184,433-12,186,723 | + | - | CX12g015770 | - | - | - | Detail |
| C2H12g16529 | 12:12,247,930-12,251,508 | + | C1H12g16885 | CX12g018511 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| C2H12g01862 | 12:12,255,102-12,256,070 | - | C1H12g31271 | CX12g015483 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| C2H12g16709 | 12:12,262,727-12,264,967 | + | - | CX12g017958 | LOC_Os12g24450 | - | - | Detail |
| C2H12g10767 | 12:12,293,874-12,294,431 | + | C1H12g09328 | CX12g017108 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| C2H12g07580 | 12:12,314,982-12,315,738 | - | - | - | - | - | - | Detail |
| C2H12g22841 | 12:12,328,661-12,336,002 | - | C1H12g01818 | CX12g016145 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| C2H12g15618 | 12:12,341,643-12,353,691 | - | C1H12g23644 | CX12g016494 | LOC_Os12g24550 | Os12g0433500 | - | Detail |
| C2H12g05476 | 12:12,401,463-12,403,730 | + | C1H12g14351 | - | LOC_Os12g24580 | Os12g0433700 | - | Detail |
| C2H12g16328 | 12:12,478,076-12,479,952 | + | C1H12g23524 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C2H12g01529 | 12:12,483,694-12,488,936 | + | C1H12g23524 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C2H12g17979 | 12:12,603,817-12,604,768 | + | - | CX12g017727 | - | Os12g0435100 | - | Detail |
| C2H12g00049 | 12:12,614,681-12,616,411 | + | C1H12g19273 | CX12g018731 | LOC_Os12g24800 | Os12g0435200 | OsCCD4b | Detail |
| C2H12g02093 | 12:12,626,417-12,627,007 | + | - | CX12g018692 | - | - | - | Detail |
| C2H12g11113 | 12:12,641,821-12,642,018 | - | C1H12g05019 | CX12g015912 | LOC_Os12g36210 | Os12g0548401 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000822 | 1:34,948,280-34,955,063 | + | C1H1g18538 | C2H1g19705 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| CX1g000036 | 1:34,956,531-34,957,646 | + | C1H1g19874 | C2H1g29254 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| CX1g003353 | 1:34,970,250-34,970,465 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g000912 | 1:34,973,015-34,976,581 | + | C1H1g08768 | C2H1g19503 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| CX1g000788 | 1:34,987,318-34,990,053 | - | C1H1g13810 | C2H1g14371 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| CX1g002877 | 1:34,993,563-34,997,264 | + | C1H1g00934 | C2H1g27794 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| CX1g005492 | 1:34,998,650-34,999,922 | - | C1H1g26380 | C2H1g06918 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| CX1g002681 | 1:35,001,221-35,004,454 | - | C1H1g26157 | C2H1g30537 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| CX1g003019 | 1:35,011,548-35,013,895 | + | C1H1g02663 | C2H1g27819 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| CX1g003471 | 1:35,014,768-35,018,309 | - | C1H1g28238 | C2H1g20684 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| CX1g001370 | 1:35,026,139-35,027,659 | + | C1H1g12819 | C2H1g22636 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| CX1g007120 | 1:35,031,210-35,032,580 | - | C1H1g18966 | - | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| CX1g001897 | 1:35,033,860-35,036,731 | + | C1H1g09218 | C2H1g29519 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| CX1g000171 | 1:35,039,632-35,039,793 | - | - | C2H1g05938 | - | Os01g0909150 | - | Detail |
| CX1g001307 | 1:35,041,815-35,051,455 | - | C1H1g21604 | C2H1g23470 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| CX1g003340 | 1:35,052,600-35,052,986 | - | - | - | - | - | - | Detail |
| CX1g000844 | 1:35,055,581-35,059,205 | + | C1H1g09277 | C2H1g03983 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| CX1g002611 | 1:35,060,767-35,061,732 | - | C1H1g09913 | - | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| CX1g003036 | 1:35,068,085-35,071,545 | + | C1H1g04879 | C2H1g20920 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| CX1g005194 | 1:35,072,157-35,073,446 | - | C1H1g17800 | C2H1g26270 | - | Os01g0910500 | - | Detail |