| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g05114 | 8:15,385,251-15,392,265 | + | C1H8g09646 | CX8g053043 | LOC_Os08g29150 | Os08g0379200 | - | Detail |
| C2H8g16770 | 8:15,393,726-15,399,605 | + | C1H8g03470 | CX8g050508 | LOC_Os08g29160 | Os08g0379300 | - | Detail |
| C2H8g27120 | 8:15,397,705-15,399,387 | - | C1H8g26319 | CX8g052251 | LOC_Os08g29170 | Os08g0379400 | - | Detail |
| C2H8g12165 | 8:15,450,527-15,453,655 | - | C1H8g09650 | - | - | - | - | Detail |
| C2H8g18465 | 8:15,481,542-15,486,168 | + | C1H8g18402 | CX8g053300 | LOC_Os08g29370 | Os08g0382400 | - | Detail |
| C2H8g04654 | 8:15,501,029-15,502,930 | + | C1H8g22797 | CX8g050449 | LOC_Os08g29400 | Os08g0383250 | - | Detail |
| C2H8g24805 | 8:15,555,366-15,559,673 | + | C1H8g03434 | CX8g052598 | LOC_Os08g29500 | Os08g0383700 | - | Detail |
| C2H8g26094 | 8:15,561,096-15,561,425 | - | C1H8g28460 | CX8g050563 | LOC_Os08g29510 | Os08g0383800 | - | Detail |
| C2H8g00791 | 8:15,562,947-15,563,702 | - | C1H8g28460 | CX8g050563 | LOC_Os08g29510 | Os08g0383800 | - | Detail |
| C2H8g05173 | 8:15,568,943-15,572,521 | + | C1H8g25632 | CX8g052164 | LOC_Os08g29520 | Os08g0384000 | - | Detail |
| C2H8g28593 | 8:15,573,571-15,577,478 | - | C1H8g16269 | CX8g051147 | LOC_Os08g29530 | Os08g0384100 | OsDRB1-4 | Detail |
| C2H8g00077 | 8:15,590,247-15,599,093 | - | C1H8g08105 | CX8g054339 | LOC_Os08g29570 | Os08g0384500 | - | Detail |
| C2H8g27569 | 8:15,625,346-15,630,068 | + | C1H8g31385 | CX8g051189 | LOC_Os08g29590 | Os08g0384900 | - | Detail |
| C2H8g09960 | 8:15,634,629-15,637,498 | + | C1H8g02035 | CX8g052002 | LOC_Os08g29650 | Os08g0385900 | - | Detail |
| C2H8g11054 | 8:15,638,158-15,640,021 | + | - | CX8g053843 | - | - | - | Detail |
| C2H8g25927 | 8:15,666,269-15,667,340 | + | C1H8g20681 | CX8g051119 | LOC_Os08g29660 | Os08g0386200 | OsWRKY69 | Detail |
| C2H8g12075 | 8:15,668,163-15,669,759 | - | C1H8g07153 | CX8g050687 | LOC_Os08g29669 | Os08g0386300 | - | Detail |
| C2H8g07861 | 8:15,683,056-15,689,179 | + | C1H8g13327 | CX8g051698 | LOC_Os08g29710 | Os08g0386700 | - | Detail |
| C2H8g16994 | 8:15,691,538-15,695,935 | + | C1H8g23560 | CX8g051835 | LOC_Os08g29720 | Os08g0386800 | - | Detail |
| C2H8g04298 | 8:15,708,458-15,714,597 | + | C1H8g23022 | CX8g053465 | LOC_Os08g29730 | Os08g0386900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000822 | 1:34,948,280-34,955,063 | + | C1H1g18538 | C2H1g19705 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| CX1g000036 | 1:34,956,531-34,957,646 | + | C1H1g19874 | C2H1g29254 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| CX1g003353 | 1:34,970,250-34,970,465 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g000912 | 1:34,973,015-34,976,581 | + | C1H1g08768 | C2H1g19503 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| CX1g000788 | 1:34,987,318-34,990,053 | - | C1H1g13810 | C2H1g14371 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| CX1g002877 | 1:34,993,563-34,997,264 | + | C1H1g00934 | C2H1g27794 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| CX1g005492 | 1:34,998,650-34,999,922 | - | C1H1g26380 | C2H1g06918 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| CX1g002681 | 1:35,001,221-35,004,454 | - | C1H1g26157 | C2H1g30537 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| CX1g003019 | 1:35,011,548-35,013,895 | + | C1H1g02663 | C2H1g27819 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| CX1g003471 | 1:35,014,768-35,018,309 | - | C1H1g28238 | C2H1g20684 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| CX1g001370 | 1:35,026,139-35,027,659 | + | C1H1g12819 | C2H1g22636 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| CX1g007120 | 1:35,031,210-35,032,580 | - | C1H1g18966 | - | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| CX1g001897 | 1:35,033,860-35,036,731 | + | C1H1g09218 | C2H1g29519 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| CX1g000171 | 1:35,039,632-35,039,793 | - | - | C2H1g05938 | - | Os01g0909150 | - | Detail |
| CX1g001307 | 1:35,041,815-35,051,455 | - | C1H1g21604 | C2H1g23470 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| CX1g003340 | 1:35,052,600-35,052,986 | - | - | - | - | - | - | Detail |
| CX1g000844 | 1:35,055,581-35,059,205 | + | C1H1g09277 | C2H1g03983 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| CX1g002611 | 1:35,060,767-35,061,732 | - | C1H1g09913 | - | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| CX1g003036 | 1:35,068,085-35,071,545 | + | C1H1g04879 | C2H1g20920 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| CX1g005194 | 1:35,072,157-35,073,446 | - | C1H1g17800 | C2H1g26270 | - | Os01g0910500 | - | Detail |