| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g12965 | 6:24,182,047-24,182,463 | - | C2H6g06613 | CX6g043496 | LOC_Os06g45950 | Os06g0671150 | - | Detail |
| C1H6g05593 | 6:24,195,543-24,198,818 | - | C2H6g23053 | CX6g043201 | LOC_Os06g45960 | Os06g0671300 | - | Detail |
| C1H6g13886 | 6:24,213,709-24,214,158 | + | C2H6g06613 | CX6g045889 | LOC_Os06g45970 | Os06g0671600 | - | Detail |
| C1H6g19408 | 6:24,218,975-24,226,634 | + | C2H6g22756 | CX6g041235 | LOC_Os06g45980 | Os06g0671700 | - | Detail |
| C1H6g17945 | 6:24,227,620-24,229,468 | + | C2H6g13643 | CX6g042168 | LOC_Os06g45990 | Os06g0671800 | OsSec14-18 | Detail |
| C1H6g20129 | 6:24,230,174-24,232,712 | - | C2H6g13523 | CX6g043235 | LOC_Os06g46000 | Os06g0671900 | - | Detail |
| C1H6g04835 | 6:24,256,370-24,257,188 | - | C2H6g03424 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C1H6g03300 | 6:24,270,337-24,270,881 | - | - | - | - | - | - | Detail |
| C1H6g06589 | 6:24,274,689-24,275,003 | - | C2H6g07492 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C1H6g00429 | 6:24,277,861-24,279,269 | - | C2H6g20505 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C1H6g04560 | 6:24,279,912-24,281,438 | - | C2H6g16269 | CX6g044377 | LOC_Os06g46060 | Os06g0672700 | - | Detail |
| C1H6g09876 | 6:24,288,922-24,290,989 | - | C2H6g04402 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C1H6g27031 | 6:24,306,103-24,308,411 | - | C2H6g20505 | CX6g044377 | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C1H6g15594 | 6:24,318,389-24,325,882 | - | - | - | - | - | - | Detail |
| C1H6g15821 | 6:24,332,761-24,333,111 | - | - | CX6g042451 | LOC_Os06g46140 | Os06g0673800 | - | Detail |
| C1H6g14950 | 6:24,337,188-24,339,185 | - | C2H6g03862 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C1H6g06204 | 6:24,362,397-24,364,590 | - | C2H6g03862 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C1H6g18354 | 6:24,387,346-24,388,516 | - | - | - | - | - | - | Detail |
| C1H6g03179 | 6:24,394,081-24,398,585 | + | C2H6g00947 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C1H6g26263 | 6:24,404,228-24,405,469 | - | - | CX6g043181 | LOC_Os06g46250 | Os06g0675200 | LIN1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000822 | 1:34,948,280-34,955,063 | + | C1H1g18538 | C2H1g19705 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| CX1g000036 | 1:34,956,531-34,957,646 | + | C1H1g19874 | C2H1g29254 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| CX1g003353 | 1:34,970,250-34,970,465 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g000912 | 1:34,973,015-34,976,581 | + | C1H1g08768 | C2H1g19503 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| CX1g000788 | 1:34,987,318-34,990,053 | - | C1H1g13810 | C2H1g14371 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| CX1g002877 | 1:34,993,563-34,997,264 | + | C1H1g00934 | C2H1g27794 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| CX1g005492 | 1:34,998,650-34,999,922 | - | C1H1g26380 | C2H1g06918 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| CX1g002681 | 1:35,001,221-35,004,454 | - | C1H1g26157 | C2H1g30537 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| CX1g003019 | 1:35,011,548-35,013,895 | + | C1H1g02663 | C2H1g27819 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| CX1g003471 | 1:35,014,768-35,018,309 | - | C1H1g28238 | C2H1g20684 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| CX1g001370 | 1:35,026,139-35,027,659 | + | C1H1g12819 | C2H1g22636 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| CX1g007120 | 1:35,031,210-35,032,580 | - | C1H1g18966 | - | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| CX1g001897 | 1:35,033,860-35,036,731 | + | C1H1g09218 | C2H1g29519 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| CX1g000171 | 1:35,039,632-35,039,793 | - | - | C2H1g05938 | - | Os01g0909150 | - | Detail |
| CX1g001307 | 1:35,041,815-35,051,455 | - | C1H1g21604 | C2H1g23470 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| CX1g003340 | 1:35,052,600-35,052,986 | - | - | - | - | - | - | Detail |
| CX1g000844 | 1:35,055,581-35,059,205 | + | C1H1g09277 | C2H1g03983 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| CX1g002611 | 1:35,060,767-35,061,732 | - | C1H1g09913 | - | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| CX1g003036 | 1:35,068,085-35,071,545 | + | C1H1g04879 | C2H1g20920 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| CX1g005194 | 1:35,072,157-35,073,446 | - | C1H1g17800 | C2H1g26270 | - | Os01g0910500 | - | Detail |